Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx16 | 0.113 | hbbe1.3 | -0.027 |
| msgn1 | 0.102 | gpm6aa | -0.026 |
| im:7138239 | 0.100 | hbae3 | -0.026 |
| mespab | 0.094 | tuba1c | -0.026 |
| BX927327.1 | 0.092 | calm1a | -0.026 |
| wu:fb97g03 | 0.092 | ccni | -0.025 |
| tbx16l | 0.091 | hbae1.1 | -0.025 |
| tbxta | 0.091 | krt4 | -0.025 |
| si:dkeyp-2e4.3 | 0.084 | fabp3 | -0.024 |
| sp5l | 0.084 | pvalb1 | -0.024 |
| XLOC-015209 | 0.082 | rtn1a | -0.024 |
| vrtn | 0.080 | si:ch1073-429i10.3.1 | -0.024 |
| snai1a | 0.079 | atp6v0cb | -0.023 |
| cdx4 | 0.078 | cyt1 | -0.023 |
| lft1 | 0.077 | pvalb2 | -0.023 |
| ved | 0.076 | rnasekb | -0.023 |
| eve1 | 0.072 | gapdhs | -0.022 |
| BX323875.1 | 0.071 | gpm6ab | -0.022 |
| hspb1 | 0.071 | stmn1b | -0.022 |
| vox | 0.071 | ckbb | -0.021 |
| wnt11f2 | 0.071 | cyt1l | -0.021 |
| cmtm6 | 0.069 | elavl3 | -0.021 |
| mespaa | 0.069 | hbbe1.1 | -0.021 |
| cdx1a | 0.067 | mdkb | -0.021 |
| her7 | 0.067 | nova2 | -0.021 |
| LOC100008030 | 0.067 | marcksl1a | -0.021 |
| ndr2 | 0.067 | actc1b | -0.020 |
| XLOC-041707 | 0.067 | atp6v1e1b | -0.020 |
| si:dkey-261j4.5 | 0.066 | prdx2 | -0.020 |
| FP102169.1 | 0.065 | wu:fb55g09 | -0.020 |
| vent | 0.065 | atp6v1g1 | -0.019 |
| XLOC-016582 | 0.065 | fam168a | -0.019 |
| apoc1 | 0.064 | gabarapl2 | -0.019 |
| rbm38 | 0.064 | gng3 | -0.019 |
| ca9 | 0.063 | atpv0e2 | -0.018 |