Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx16 | 0.137 | calm1a | -0.036 |
| im:7138239 | 0.111 | tuba1c | -0.035 |
| mespab | 0.109 | si:ch1073-429i10.3.1 | -0.034 |
| msgn1 | 0.109 | ccni | -0.033 |
| wu:fb97g03 | 0.108 | gapdhs | -0.033 |
| XLOC-041707 | 0.106 | gpm6aa | -0.033 |
| si:dkeyp-2e4.3 | 0.105 | hbbe1.3 | -0.033 |
| tbxta | 0.105 | rnasekb | -0.032 |
| vrtn | 0.101 | rtn1a | -0.032 |
| tbx16l | 0.096 | atp6v0cb | -0.031 |
| lft1 | 0.095 | hbae3 | -0.031 |
| sp5l | 0.095 | pvalb1 | -0.031 |
| XLOC-016582 | 0.095 | pvalb2 | -0.031 |
| BX927327.1 | 0.094 | stmn1b | -0.030 |
| ndr2 | 0.092 | marcksl1a | -0.030 |
| LOC100008030 | 0.091 | ckbb | -0.029 |
| ved | 0.090 | fabp3 | -0.029 |
| XLOC-015209 | 0.090 | hbae1.1 | -0.029 |
| hspb1 | 0.089 | atp6v1e1b | -0.028 |
| cdx4 | 0.088 | elavl3 | -0.028 |
| si:dkey-261j4.5 | 0.088 | gng3 | -0.028 |
| snai1a | 0.086 | gpm6ab | -0.028 |
| stm | 0.086 | nova2 | -0.028 |
| vox | 0.084 | sncb | -0.028 |
| cmtm6 | 0.083 | atp6v1g1 | -0.027 |
| eve1 | 0.083 | cyt1 | -0.027 |
| cdx1a | 0.082 | hbbe1.1 | -0.027 |
| FP102169.1 | 0.082 | krt4 | -0.027 |
| wnt11f2 | 0.081 | mdkb | -0.027 |
| XLOC-007771 | 0.080 | vamp2 | -0.027 |
| her7 | 0.079 | actc1b | -0.026 |
| mespaa | 0.079 | atpv0e2 | -0.025 |
| s100a1 | 0.079 | elavl4 | -0.025 |
| ddx4 | 0.078 | si:dkeyp-75h12.5 | -0.025 |
| si:dkey-66i24.9 | 0.078 | snap25a | -0.025 |