| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| otx1 | 0.259 | meis2b | -0.048 |
| tal1 | 0.152 | meis1b | -0.046 |
| tal2 | 0.144 | hoxb3a | -0.046 |
| sox14 | 0.122 | nrn1a | -0.039 |
| otx2b | 0.119 | nhlh2 | -0.035 |
| emx2 | 0.117 | adcyap1b | -0.034 |
| zfpm2b | 0.108 | fabp3 | -0.031 |
| CR936482.1 | 0.102 | pou3f1 | -0.031 |
| LOC110439787 | 0.094 | hoxc4a | -0.030 |
| gata3 | 0.089 | islr2 | -0.029 |
| otx2a | 0.089 | si:ch73-21g5.7 | -0.029 |
| slc6a1b | 0.085 | mab21l2 | -0.029 |
| nfixb | 0.084 | meis2a | -0.029 |
| zfpm2a | 0.077 | gbx1 | -0.029 |
| tgfa | 0.076 | hoxd3a | -0.028 |
| satb1b | 0.069 | hoxa3a | -0.028 |
| LOC103909284 | 0.068 | dscaml1 | -0.028 |
| gata2a | 0.066 | hoxd4a | -0.028 |
| pcp4l1 | 0.064 | lhx9 | -0.027 |
| nfia | 0.058 | ebf1a | -0.027 |
| rorab | 0.058 | rpl37 | -0.027 |
| crabp1a | 0.057 | hoxb2a | -0.027 |
| slc32a1 | 0.056 | slc17a6a | -0.026 |
| lmo1 | 0.055 | LOC798783 | -0.026 |
| gad1b | 0.053 | mab21l1 | -0.026 |
| znf385c | 0.052 | neurod1 | -0.026 |
| zgc:101100 | 0.052 | her4.2 | -0.026 |
| znf296 | 0.052 | nes | -0.025 |
| sox2 | 0.051 | nr2f6b | -0.025 |
| prok1 | 0.050 | si:ch211-57n23.4 | -0.025 |
| six7 | 0.049 | lrrn1 | -0.025 |
| ehbp1 | 0.048 | tshz2 | -0.023 |
| pax5 | 0.047 | hoxc1a | -0.023 |
| LOC110438334 | 0.047 | raraa | -0.023 |
| mir181b-3 | 0.047 | rps17 | -0.023 |