| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| otx1 | 0.253 | hoxb3a | -0.031 |
| otx2a | 0.131 | tuba8l2 | -0.031 |
| tal2 | 0.116 | zgc:162730 | -0.029 |
| otx2b | 0.107 | ahnak | -0.028 |
| CR936482.1 | 0.098 | krt4 | -0.028 |
| tal1 | 0.098 | capns1a | -0.027 |
| sox14 | 0.096 | cyt1 | -0.027 |
| zfpm2b | 0.089 | si:dkey-16p21.8 | -0.027 |
| emx2 | 0.081 | anxa1a | -0.026 |
| cracr2ab | 0.066 | anxa2a | -0.026 |
| zgc:101100 | 0.066 | cyt1l | -0.026 |
| gata3 | 0.063 | hoxc3a | -0.026 |
| pmelb | 0.063 | krtt1c19e | -0.026 |
| zfpm2a | 0.063 | s100a10b | -0.026 |
| hesx1 | 0.062 | wu:fb18f06 | -0.026 |
| shisa2a | 0.062 | meis2b | -0.026 |
| slc6a1b | 0.062 | krt5 | -0.025 |
| nfixb | 0.061 | meis1b | -0.025 |
| wnt8b | 0.061 | mgst1.2 | -0.025 |
| sox2 | 0.057 | pfn1 | -0.025 |
| en2b | 0.056 | pycard | -0.025 |
| LOC103909284 | 0.056 | si:ch211-105c13.3 | -0.025 |
| msnb | 0.054 | tmsb1 | -0.025 |
| en2a | 0.051 | arhgdig | -0.024 |
| lmo1 | 0.051 | cav1 | -0.024 |
| pax5 | 0.051 | cav2 | -0.024 |
| dct | 0.049 | cfl1l | -0.024 |
| gata2a | 0.047 | col1a2 | -0.024 |
| pmela | 0.047 | icn | -0.024 |
| wnt7ba | 0.047 | icn2 | -0.024 |
| abcg2d | 0.047 | pnp5a | -0.024 |
| mdkb | 0.046 | si:ch211-195b11.3 | -0.024 |
| oca2 | 0.046 | capgb | -0.023 |
| satb1b | 0.046 | cebpd | -0.023 |
| dmbx1a | 0.045 | ckap4 | -0.023 |