Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| six2a | 0.263 | hmga1a | -0.056 |
| col9a1a | 0.133 | fabp3 | -0.054 |
| cnmd | 0.123 | tmsb4x | -0.054 |
| col9a2 | 0.119 | stmn1a | -0.051 |
| fibina | 0.115 | snrpb | -0.048 |
| otos | 0.110 | snrpd1 | -0.048 |
| col2a1a | 0.109 | si:dkey-151g10.6 | -0.047 |
| col9a3 | 0.107 | apex1 | -0.047 |
| col2a1b | 0.100 | pcna | -0.046 |
| trabd2a | 0.098 | dut | -0.046 |
| LO018188.1 | 0.095 | snrpf | -0.044 |
| ucmab | 0.093 | marcksb | -0.044 |
| hpgd | 0.088 | ddx39ab | -0.043 |
| matn4 | 0.088 | hmgb2a | -0.043 |
| col11a2 | 0.086 | mcm7 | -0.042 |
| foxc1b | 0.086 | sub1a | -0.042 |
| zgc:158343 | 0.085 | cbx3a | -0.041 |
| zgc:162730 | 0.083 | rps28 | -0.041 |
| sparc | 0.083 | rbbp4 | -0.040 |
| tpm1 | 0.083 | cirbpa | -0.040 |
| ctgfb | 0.082 | h2afvb | -0.039 |
| eya1 | 0.082 | lin28a | -0.039 |
| six1a | 0.081 | snrpe | -0.039 |
| cpn1 | 0.080 | aldh1a2 | -0.039 |
| angptl1a | 0.079 | selenoh | -0.039 |
| foxp4 | 0.078 | sumo3b | -0.038 |
| olfml3b | 0.078 | ranbp1 | -0.038 |
| wfdc2 | 0.077 | chaf1a | -0.038 |
| serpinf1 | 0.077 | mycn | -0.037 |
| VIT | 0.076 | rpa3 | -0.037 |
| crispld1a | 0.075 | sall4 | -0.037 |
| klf2a | 0.075 | crabp1b | -0.036 |
| fgfbp2b | 0.074 | pitx2 | -0.036 |
| gdf5 | 0.074 | tubb2b | -0.036 |
| rarga | 0.074 | snrpg | -0.036 |