Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| six2a | 0.257 | si:ch211-137a8.4 | -0.039 |
| col9a1a | 0.157 | fabp3 | -0.035 |
| fibina | 0.151 | XLOC-003690 | -0.033 |
| six1a | 0.134 | nova2 | -0.032 |
| cnmd | 0.122 | XLOC-003689 | -0.031 |
| otos | 0.121 | XLOC-003692 | -0.030 |
| col9a2 | 0.117 | her15.1 | -0.030 |
| foxc1b | 0.116 | apex1 | -0.029 |
| fgfbp2b | 0.112 | cldn5a | -0.029 |
| LO018188.1 | 0.112 | marcksb | -0.029 |
| col9a3 | 0.110 | her12 | -0.027 |
| col2a1b | 0.109 | sox3 | -0.027 |
| col11a1b | 0.108 | abhd6a | -0.027 |
| pmp22a | 0.106 | mcm7 | -0.026 |
| CU929237.1 | 0.104 | snrpd1 | -0.026 |
| serpinf1 | 0.103 | snrpf | -0.026 |
| angptl1a | 0.102 | sox19a | -0.026 |
| col2a1a | 0.102 | tuba1a | -0.026 |
| olfml3b | 0.102 | tuba1c | -0.026 |
| matn4 | 0.101 | ddx39ab | -0.025 |
| ctgfb | 0.099 | her2 | -0.025 |
| col5a1 | 0.098 | msi1 | -0.025 |
| tgfbi | 0.097 | pcna | -0.025 |
| mfap2 | 0.097 | cbx3a | -0.024 |
| eya1 | 0.096 | dla | -0.024 |
| cthrc1a | 0.092 | hes6 | -0.024 |
| dcn | 0.092 | seta | -0.024 |
| barx1 | 0.091 | snrpb | -0.024 |
| cdh11 | 0.090 | gfap | -0.023 |
| prrx1a | 0.090 | gpm6aa | -0.023 |
| lum | 0.088 | rbbp4 | -0.023 |
| mmp2 | 0.088 | si:ch73-21g5.7 | -0.023 |
| wfdc2 | 0.088 | slbp | -0.023 |
| col12a1a | 0.087 | her4.2 | -0.023 |
| crispld1a | 0.087 | hmgb3b | -0.022 |