Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| six2a | 0.135 | si:ch211-222l21.1 | -0.020 |
| si:ch211-251g8.5 | 0.120 | hmga1a | -0.018 |
| si:dkey-81h8.1 | 0.111 | hmgb2b | -0.016 |
| LOC108181163 | 0.110 | si:ch211-137a8.4 | -0.015 |
| LOC110440217 | 0.095 | seta | -0.015 |
| mmp25b | 0.088 | sox3 | -0.014 |
| six1b | 0.085 | hmgn2 | -0.014 |
| six2b | 0.080 | pcna | -0.014 |
| sst6 | 0.079 | rbbp4 | -0.013 |
| eya4 | 0.079 | mcm7 | -0.013 |
| LOC101883028 | 0.076 | nasp | -0.013 |
| eya1 | 0.074 | chaf1a | -0.013 |
| BX511259.1 | 0.070 | h2afvb | -0.012 |
| six1a | 0.070 | msi1 | -0.012 |
| XLOC-008781 | 0.064 | rpa3 | -0.012 |
| hps5 | 0.064 | ddx39ab | -0.012 |
| isl2b | 0.063 | baz1b | -0.012 |
| tlx2 | 0.061 | sox19a | -0.012 |
| CABZ01046996.1 | 0.061 | cx43.4 | -0.012 |
| emb | 0.059 | si:ch211-288g17.3 | -0.012 |
| XLOC-019672 | 0.058 | abhd6a | -0.012 |
| syt1b | 0.056 | nova2 | -0.012 |
| or126-1 | 0.056 | srsf1a | -0.012 |
| RF00096 | 0.055 | top1l | -0.012 |
| LOC101886860 | 0.054 | XLOC-003690 | -0.012 |
| ppp1r1c | 0.053 | khdrbs1a | -0.012 |
| CABZ01072077.1 | 0.052 | ccnd1 | -0.012 |
| si:dkey-71l4.2 | 0.051 | hmgb2a | -0.012 |
| CU693471.1 | 0.049 | sox2 | -0.011 |
| XLOC-004437 | 0.048 | lig1 | -0.011 |
| CABZ01118738.1 | 0.047 | mcm6 | -0.011 |
| XLOC-022158 | 0.047 | snrpg | -0.011 |
| FP016012.1 | 0.047 | her15.1 | -0.011 |
| FO818722.1 | 0.045 | mki67 | -0.011 |
| znf1016 | 0.045 | sumo3b | -0.011 |