| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| gdf10a | 0.278 | stx1b | -0.083 |
| atoh1a | 0.261 | gng3 | -0.080 |
| olig3 | 0.233 | stxbp1a | -0.078 |
| msx1b | 0.230 | elavl4 | -0.078 |
| msx3 | 0.207 | gng2 | -0.076 |
| zic5 | 0.198 | tuba1c | -0.076 |
| atoh1b | 0.195 | cplx2 | -0.075 |
| wnt10b | 0.192 | sncb | -0.075 |
| BX469902.1 | 0.189 | snap25a | -0.075 |
| zic2a | 0.183 | vamp2 | -0.073 |
| id1 | 0.161 | rtn1b | -0.073 |
| nog2 | 0.159 | syt2a | -0.071 |
| zic1 | 0.155 | nsg2 | -0.071 |
| cdh6 | 0.155 | jagn1a | -0.071 |
| pax3a | 0.153 | lin28a | -0.069 |
| zic2b | 0.151 | onecut1 | -0.069 |
| atoh1c | 0.147 | ywhah | -0.069 |
| mdkb | 0.145 | tmem59l | -0.068 |
| igfbp7 | 0.144 | calm1a | -0.068 |
| wls | 0.143 | cplx2l | -0.066 |
| nog1 | 0.141 | stmn2a | -0.066 |
| cdon | 0.139 | id4 | -0.065 |
| mdka | 0.138 | mllt11 | -0.065 |
| gas1a | 0.135 | atp6v0cb | -0.064 |
| pdgfaa | 0.133 | map1aa | -0.064 |
| draxin | 0.129 | rbfox1 | -0.064 |
| cldn7a | 0.128 | gap43 | -0.063 |
| id3 | 0.124 | gpm6ab | -0.063 |
| zic3 | 0.123 | tubb2b | -0.063 |
| clybl | 0.121 | sncgb | -0.063 |
| slc1a3a | 0.121 | thsd7aa | -0.062 |
| zic4 | 0.121 | atp1a3a | -0.062 |
| boc | 0.117 | ywhag2 | -0.061 |
| rgcc | 0.117 | csdc2a | -0.061 |
| si:ch211-251b21.1 | 0.117 | aplp1 | -0.060 |