| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| atoh1a | 0.446 | gpm6ab | -0.073 |
| olig3 | 0.319 | gng3 | -0.070 |
| atoh1b | 0.310 | sncb | -0.068 |
| msx1b | 0.305 | id4 | -0.068 |
| wnt10b | 0.248 | rtn1b | -0.067 |
| msx3 | 0.236 | ywhah | -0.065 |
| fibinb | 0.225 | atp6v0cb | -0.064 |
| olig4 | 0.219 | vamp2 | -0.062 |
| nog2 | 0.215 | stx1b | -0.062 |
| cdon | 0.183 | gapdhs | -0.062 |
| cdh6 | 0.180 | elavl4 | -0.061 |
| her12 | 0.165 | gpm6aa | -0.061 |
| im:7152348 | 0.161 | ckbb | -0.061 |
| lfng | 0.156 | gap43 | -0.059 |
| LOC798783 | 0.155 | ywhag2 | -0.059 |
| wnt1 | 0.155 | nsg2 | -0.059 |
| gdf10a | 0.154 | stxbp1a | -0.057 |
| bmp5 | 0.147 | zgc:65894 | -0.056 |
| masp1 | 0.143 | gabrb4 | -0.056 |
| nr2f6b | 0.142 | nova1 | -0.055 |
| notch3 | 0.141 | snap25a | -0.055 |
| cldn5a | 0.141 | mllt11 | -0.054 |
| lrrn1 | 0.139 | csdc2a | -0.054 |
| id1 | 0.139 | fez1 | -0.054 |
| msx2b | 0.139 | calm2a | -0.054 |
| dld | 0.137 | tmsb2 | -0.053 |
| cep131 | 0.135 | aplp1 | -0.053 |
| nkd1 | 0.133 | stmn2a | -0.053 |
| BX957346.1 | 0.130 | dpysl3 | -0.052 |
| fstl1a | 0.129 | olfm1b | -0.052 |
| si:ch73-21g5.7 | 0.129 | atp6v1e1b | -0.052 |
| zic5 | 0.129 | zc4h2 | -0.051 |
| epha2a | 0.126 | gng2 | -0.051 |
| sertad2a | 0.124 | h2afy2 | -0.051 |
| btg2 | 0.122 | map1aa | -0.051 |