Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbxta | 0.192 | sox3 | -0.129 |
| osr1 | 0.185 | cxcr4b | -0.102 |
| wnt11f2 | 0.181 | sox19a | -0.075 |
| BX927327.1 | 0.178 | cited4b | -0.074 |
| msgn1 | 0.170 | cxcr4a | -0.073 |
| FP102169.1 | 0.167 | shisa2a | -0.067 |
| ndr2 | 0.165 | foxd5 | -0.064 |
| fgf8a | 0.164 | id1 | -0.064 |
| mespab | 0.163 | inka1a | -0.061 |
| sebox | 0.161 | asb11 | -0.060 |
| ndr1 | 0.161 | si:ch1073-80i24.3 | -0.047 |
| urad | 0.157 | zic2b | -0.046 |
| zic2a | 0.151 | si:ch211-173m16.2 | -0.046 |
| lhx1a | 0.150 | foxh1 | -0.046 |
| hes6 | 0.148 | stk35l | -0.046 |
| BX072554.2 | 0.145 | sb:cb81 | -0.046 |
| si:ch211-173n18.3 | 0.144 | LOC101885477 | -0.044 |
| dkk1b | 0.140 | pfkfb4b | -0.043 |
| fscn1a | 0.132 | sox2 | -0.043 |
| notum1a | 0.132 | sfrp1a | -0.043 |
| aplnrb | 0.131 | zgc:64022 | -0.043 |
| mespaa | 0.131 | si:ch211-170d8.2 | -0.041 |
| tpbga | 0.129 | nasp | -0.040 |
| eve1 | 0.125 | rab11fip1b | -0.040 |
| lft1 | 0.124 | tsc22d2 | -0.039 |
| hoxa1a | 0.123 | capza1a | -0.039 |
| aldh1a2 | 0.122 | si:rp71-45k5.2 | -0.039 |
| LOC101883201 | 0.120 | bcat2 | -0.039 |
| cyp1c2 | 0.120 | kazald2 | -0.039 |
| fgf3 | 0.120 | klhl20 | -0.039 |
| flrt3 | 0.117 | si:dkey-56m19.5 | -0.039 |
| neu4 | 0.115 | pho | -0.039 |
| irx3a | 0.115 | si:ch73-299h12.3 | -0.038 |
| gata5 | 0.114 | si:dkey-11o15.10 | -0.037 |
| BX649242.1 | 0.112 | cldnd | -0.037 |