homeobox A1a
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| scospondin | 0.094 | krt5 | -0.014 |
| wnt4b | 0.074 | aldob | -0.013 |
| si:ch211-63b16.4 | 0.072 | cyt1 | -0.013 |
| bicc2 | 0.071 | cyt1l | -0.013 |
| cdkl1 | 0.070 | mgst1.2 | -0.013 |
| tbata | 0.068 | wu:fb18f06 | -0.013 |
| aplnr2 | 0.066 | krtt1c19e | -0.012 |
| cyr61l2 | 0.065 | si:dkey-16p21.8 | -0.012 |
| npr3 | 0.064 | wu:fa03e10 | -0.012 |
| wnt4a | 0.064 | aep1 | -0.011 |
| oc90 | 0.063 | anxa1a | -0.011 |
| slit1b | 0.063 | icn2 | -0.011 |
| shhb | 0.062 | krt17 | -0.011 |
| urp2 | 0.061 | krt4 | -0.011 |
| si:ch73-265d7.2 | 0.060 | pnp5a | -0.011 |
| hoxc1a | 0.058 | s100a10b | -0.011 |
| si:ch211-155m12.5 | 0.058 | si:ch211-195b11.3 | -0.011 |
| si:ch211-153f2.7 | 0.055 | zgc:153284 | -0.011 |
| ntn1b | 0.054 | zgc:193505 | -0.011 |
| shha | 0.054 | agr1 | -0.010 |
| hoxb1b | 0.053 | anxa1c | -0.010 |
| pkd1b | 0.053 | apodb | -0.010 |
| corin | 0.052 | cfl1l | -0.010 |
| hoxb5b | 0.052 | cldne | -0.010 |
| lrrc39 | 0.052 | dhrs13a.2 | -0.010 |
| meis1a | 0.052 | fbp1a | -0.010 |
| col8a1a | 0.051 | hrc | -0.010 |
| morn3 | 0.051 | icn | -0.010 |
| cd59 | 0.050 | lye | -0.010 |
| hoxb3a | 0.050 | ppl | -0.010 |
| hoxb5a | 0.050 | pycard | -0.010 |
| TC2N | 0.050 | scel | -0.010 |
| cfap126 | 0.049 | si:ch211-105c13.3 | -0.010 |
| hoxa3a | 0.049 | si:ch211-125o16.4 | -0.010 |
| si:ch211-163l21.7 | 0.049 | si:ch211-157c3.4 | -0.010 |