homeobox A1a
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| aplnr2 | 0.191 | CU467822.1 | -0.050 |
| ctgfa | 0.190 | ckbb | -0.047 |
| col9a3 | 0.189 | ptmaa | -0.045 |
| col8a1a | 0.180 | rtn1a | -0.038 |
| BX908782.3 | 0.171 | tmsb4x | -0.037 |
| npr3 | 0.168 | mdkb | -0.036 |
| optc | 0.167 | tmsb | -0.034 |
| b3gnt7l | 0.163 | slc1a2b | -0.034 |
| col9a2 | 0.163 | CR848047.1 | -0.032 |
| col9a1b | 0.161 | elavl3 | -0.032 |
| slit1b | 0.158 | CU634008.1 | -0.032 |
| wnt4a | 0.157 | pvalb1 | -0.031 |
| myl9a | 0.156 | actc1b | -0.031 |
| spon2a | 0.155 | pvalb2 | -0.030 |
| col2a1a | 0.150 | myt1b | -0.030 |
| cyr61l2 | 0.149 | hmgb3a | -0.030 |
| emilin3a | 0.147 | stmn1b | -0.029 |
| col2a1b | 0.145 | pou3f1 | -0.028 |
| shhb | 0.143 | lfng | -0.027 |
| oc90 | 0.143 | slc6a1b | -0.027 |
| clu | 0.142 | hmgb1b | -0.027 |
| scospondin | 0.139 | rcc2 | -0.027 |
| CU657977.1 | 0.137 | mt-atp6 | -0.026 |
| thbs1b | 0.137 | cspg5a | -0.026 |
| sulf1 | 0.136 | ptmab | -0.026 |
| arxa | 0.136 | efhd1 | -0.026 |
| wnt4b | 0.136 | ppap2d | -0.026 |
| trabd2b | 0.135 | fez1 | -0.026 |
| scinlb | 0.135 | apex1 | -0.025 |
| col11a1a | 0.134 | acbd7 | -0.025 |
| r3hdml | 0.134 | eif4ebp1 | -0.025 |
| corin | 0.133 | zgc:165461 | -0.025 |
| phldb2b | 0.132 | nova2 | -0.025 |
| lcn15 | 0.131 | hbae3 | -0.025 |
| fxyd1 | 0.130 | si:ch73-30b17.2 | -0.025 |