| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fmoda | 0.282 | fgfbp2b | -0.128 |
| ca6 | 0.262 | si:ch211-156j16.1 | -0.100 |
| msx1b | 0.221 | ecrg4a | -0.094 |
| cdon | 0.218 | matn1 | -0.087 |
| pitx2 | 0.202 | barx1 | -0.084 |
| msx3 | 0.202 | mia | -0.074 |
| lamc3 | 0.199 | dlx5a | -0.074 |
| pitx1 | 0.195 | col11a2 | -0.071 |
| ccdc80l2 | 0.190 | acana | -0.071 |
| pitx3 | 0.189 | wwp2 | -0.070 |
| fstl3 | 0.179 | snorc | -0.069 |
| adma | 0.175 | foxc1b | -0.068 |
| csf1b | 0.173 | hapln1a | -0.067 |
| lmx1ba | 0.171 | si:dkey-19b23.8 | -0.067 |
| tnn | 0.171 | tnxba | -0.066 |
| tnmd | 0.170 | ptmaa | -0.065 |
| nid1b | 0.169 | sox9a | -0.064 |
| lmx1bb | 0.163 | dlx2a | -0.063 |
| axin2 | 0.162 | wisp3 | -0.063 |
| fhl2a | 0.162 | ucmab | -0.062 |
| alx4a | 0.162 | hpgd | -0.061 |
| wls | 0.162 | dlx1a | -0.061 |
| gpc1a | 0.158 | foxf1 | -0.061 |
| col6a3 | 0.156 | dlx4a | -0.061 |
| alcama | 0.154 | dlx4b | -0.061 |
| notum1b | 0.154 | dlx3b | -0.061 |
| lrrc58a | 0.151 | foxf2a | -0.060 |
| ism1 | 0.151 | emilin3a | -0.058 |
| zic1 | 0.148 | lhx6 | -0.057 |
| col4a5 | 0.147 | faua | -0.057 |
| aqp3a | 0.147 | gsc | -0.057 |
| vcam1b | 0.145 | rpl39 | -0.056 |
| zgc:114181 | 0.144 | CR848683.2 | -0.056 |
| bhmt | 0.144 | hapln1b | -0.056 |
| kitlga | 0.143 | ppp1r1c | -0.056 |