| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tkta | 0.291 | si:ch211-222l21.1 | -0.089 |
| scinla | 0.280 | hmga1a | -0.083 |
| si:dkey-164f24.2 | 0.271 | hmgb2a | -0.079 |
| wnt9b | 0.259 | meis1b | -0.078 |
| gyg1b | 0.250 | hmgb2b | -0.076 |
| lmx1ba | 0.245 | ptmab | -0.075 |
| lrrc58a | 0.245 | hoxb3a | -0.070 |
| pitx3 | 0.238 | mab21l2 | -0.069 |
| lmx1bb | 0.229 | meis1a | -0.069 |
| pitx2 | 0.217 | tubb2b | -0.066 |
| mgarp | 0.214 | h2afvb | -0.066 |
| fgl2a | 0.210 | hmgn2 | -0.062 |
| tubb6 | 0.199 | h3f3a | -0.062 |
| gbe1a | 0.198 | snrpd1 | -0.059 |
| ccka | 0.197 | stmn1a | -0.059 |
| qdpra | 0.188 | nucks1a | -0.058 |
| timp4.1 | 0.186 | marcksb | -0.056 |
| pitx1 | 0.180 | snrpf | -0.056 |
| rcan2 | 0.175 | dlx2a | -0.055 |
| alpl | 0.167 | ddx39ab | -0.055 |
| si:ch211-202p1.5 | 0.162 | snrpb | -0.053 |
| gpc1a | 0.158 | hmgn6 | -0.053 |
| FO681288.1 | 0.157 | khdrbs1a | -0.053 |
| tfap2b | 0.152 | dut | -0.053 |
| irx1b | 0.149 | si:ch73-1a9.3 | -0.052 |
| ppp1r3cb | 0.147 | si:ch73-281n10.2 | -0.051 |
| arhgap20b | 0.146 | hnrnpa0b | -0.051 |
| spock3 | 0.139 | cbx3a | -0.051 |
| cadm4 | 0.139 | lin28a | -0.051 |
| si:dkey-16p21.8 | 0.138 | si:ch1073-429i10.3.1 | -0.051 |
| ttc36 | 0.138 | seta | -0.050 |
| fhl2a | 0.136 | hnrnpaba | -0.050 |
| irs2a | 0.135 | ptges3b | -0.049 |
| pcbd1 | 0.134 | snrpe | -0.049 |
| slc43a3b | 0.134 | hand2 | -0.049 |