| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| gfra3 | 0.371 | tuba8l2 | -0.085 |
| foxl2b | 0.350 | hspb1 | -0.074 |
| tbx1 | 0.319 | apoc1 | -0.061 |
| XLOC-019859 | 0.296 | tcf15 | -0.059 |
| ret | 0.290 | BX927258.1 | -0.057 |
| XLOC-007078 | 0.285 | hoxb7a | -0.056 |
| stc2b | 0.263 | cdx4 | -0.055 |
| hlx1 | 0.244 | arid3c | -0.054 |
| foxl2a | 0.232 | hoxb9a | -0.053 |
| isl2a | 0.216 | si:dkey-16p21.8 | -0.053 |
| isl2b | 0.201 | apoeb | -0.052 |
| pdgfc | 0.185 | hoxc6b | -0.050 |
| lhx2b | 0.172 | serpinh1b | -0.050 |
| tlx1 | 0.164 | tob1a | -0.049 |
| grp | 0.157 | BX001014.2 | -0.048 |
| foxf2a | 0.157 | sp5l | -0.048 |
| dlx4b | 0.152 | mybphb | -0.048 |
| ebf1a | 0.152 | si:ch211-43f4.1 | -0.048 |
| tmem98 | 0.151 | hsp90aa1.1 | -0.047 |
| fgd4a | 0.150 | angptl7 | -0.047 |
| ociad2 | 0.142 | dld | -0.047 |
| ptmaa | 0.141 | hes6 | -0.047 |
| msc | 0.139 | asph | -0.047 |
| notch3 | 0.135 | gatm | -0.046 |
| si:ch211-263k4.2 | 0.134 | efnb2b | -0.046 |
| tuba8l3 | 0.131 | aldoab | -0.046 |
| prdx2 | 0.131 | hoxc3a | -0.046 |
| dlx3b | 0.129 | vox | -0.045 |
| cyp26c1 | 0.129 | meox1 | -0.045 |
| nptx1l | 0.128 | efemp2a | -0.045 |
| ptprz1b | 0.125 | rbp7b | -0.045 |
| hoxa2b | 0.122 | hoxc8a | -0.045 |
| six1a | 0.121 | XLOC-042222 | -0.045 |
| fbln5 | 0.121 | fn1b | -0.044 |
| si:ch211-39i22.1 | 0.119 | atp1a2a | -0.044 |