Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tkta | 0.197 | si:ch211-222l21.1 | -0.034 |
| scinla | 0.187 | hmga2 | -0.031 |
| gyg1b | 0.181 | marcksl1b | -0.030 |
| si:dkey-164f24.2 | 0.172 | foxp4 | -0.028 |
| wnt9b | 0.167 | fibina | -0.028 |
| nitr8 | 0.166 | hapln1a | -0.028 |
| mgarp | 0.149 | pmp22a | -0.027 |
| tubb6 | 0.143 | si:ch211-286o17.1 | -0.027 |
| lrrc58a | 0.134 | marcksb | -0.027 |
| gbe1a | 0.128 | tubb2b | -0.026 |
| qdpra | 0.126 | cnmd | -0.026 |
| lmx1ba | 0.123 | col2a1a | -0.026 |
| LO018605.3 | 0.114 | si:dkey-261h17.1 | -0.025 |
| si:ch73-236c18.2 | 0.111 | NC-002333.4 | -0.025 |
| pitx3 | 0.109 | alyref | -0.025 |
| ccka | 0.109 | hmgb2a | -0.024 |
| pitx1 | 0.102 | matn4 | -0.024 |
| ppp1r3cb | 0.099 | hmgn6 | -0.024 |
| vat1l | 0.099 | hmgb2b | -0.024 |
| LOC108183299 | 0.098 | cbx3a | -0.024 |
| FO681288.1 | 0.096 | fgfbp2b | -0.024 |
| pitx2 | 0.092 | si:ch1073-429i10.3.1 | -0.023 |
| timp4.1 | 0.091 | cirbpb | -0.023 |
| sgms2a | 0.091 | mdka | -0.023 |
| pcbd1 | 0.090 | hnrnpub | -0.023 |
| LOC103910280 | 0.089 | tnc | -0.023 |
| si:dkey-16p21.8 | 0.089 | ebf1a | -0.023 |
| tmtops2a | 0.084 | col2a1b | -0.022 |
| rcan2 | 0.083 | hmgn2 | -0.022 |
| cadm4 | 0.083 | hspa5 | -0.021 |
| thrap3a | 0.081 | cpn1 | -0.021 |
| irs2a | 0.081 | tgfbi | -0.021 |
| fgl2a | 0.080 | col9a1a | -0.021 |
| smpdl3a | 0.079 | setb | -0.021 |
| tfap2b | 0.079 | h3f3a | -0.021 |