| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| zgc:92630 | 0.211 | shha | -0.075 |
| vim | 0.154 | nanos1 | -0.072 |
| neurod4 | 0.132 | elavl4 | -0.068 |
| mdka | 0.131 | ntn1b | -0.067 |
| gfap | 0.126 | foxa2 | -0.066 |
| fstl1a | 0.125 | foxa | -0.066 |
| gbx1 | 0.118 | pou2f2a | -0.061 |
| pbxip1b | 0.118 | zfhx4 | -0.059 |
| dlb | 0.115 | arxa | -0.059 |
| si:dkey-245n4.2 | 0.115 | nkx2.9 | -0.056 |
| col18a1a | 0.114 | nrn1a | -0.056 |
| jag1a | 0.113 | shhb | -0.056 |
| irx3b | 0.113 | zfhx3 | -0.054 |
| cav1 | 0.107 | aplnr2 | -0.053 |
| sp8a | 0.107 | foxa1 | -0.053 |
| ebf2 | 0.105 | esrrga | -0.052 |
| sp8b | 0.104 | sox4a | -0.052 |
| plecb | 0.104 | sncgb | -0.052 |
| sept5a | 0.101 | otx2a | -0.052 |
| gas1b | 0.101 | spon1a | -0.051 |
| nes | 0.100 | nkx2.2b | -0.051 |
| actb2 | 0.099 | col8a1a | -0.050 |
| stm | 0.099 | mycn | -0.050 |
| cldn7a | 0.099 | nkx6.2 | -0.050 |
| slc10a1 | 0.096 | sulf1 | -0.050 |
| sema4e | 0.096 | ndrg4 | -0.050 |
| CABZ01093502.1 | 0.095 | ptmaa | -0.049 |
| ca6 | 0.095 | tox2 | -0.049 |
| inka1b | 0.094 | sv2a | -0.049 |
| cep131 | 0.093 | rai1 | -0.049 |
| pax3a | 0.093 | snap25b | -0.049 |
| onecutl | 0.092 | isl2b | -0.048 |
| col4a5 | 0.091 | csdc2a | -0.048 |
| wu:fi04e12 | 0.091 | si:dkey-56f14.7 | -0.047 |
| nhlh2 | 0.091 | timd4 | -0.047 |