| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax3a | 0.294 | gpm6ab | -0.092 |
| slc1a3a | 0.223 | elavl4 | -0.085 |
| lbx1b | 0.197 | gng3 | -0.079 |
| gas1b | 0.171 | ntn1a | -0.076 |
| irx3b | 0.168 | gapdhs | -0.075 |
| gas1a | 0.167 | ckbb | -0.075 |
| zic2b | 0.162 | cadm4 | -0.073 |
| prss35 | 0.161 | snap25a | -0.073 |
| msx1b | 0.151 | rtn1b | -0.072 |
| AL845362.1 | 0.150 | sulf2b | -0.072 |
| mdka | 0.150 | cplx2 | -0.072 |
| gsx1 | 0.144 | nkx6.1 | -0.072 |
| wnt11r | 0.143 | cotl1 | -0.071 |
| boc | 0.142 | stmn2a | -0.070 |
| tfap2b | 0.140 | vamp2 | -0.069 |
| dla | 0.140 | calm1a | -0.069 |
| efnb2b | 0.137 | id4 | -0.068 |
| XLOC-003689 | 0.135 | ptmaa | -0.068 |
| pax7a | 0.131 | stx1b | -0.067 |
| sb:cb81 | 0.128 | mllt11 | -0.067 |
| sox3 | 0.127 | gnao1a | -0.066 |
| si:ch211-251b21.1 | 0.126 | alcama | -0.066 |
| dhrs3b | 0.126 | tmem59l | -0.066 |
| cygb1 | 0.125 | sncb | -0.066 |
| hs3st3b1a | 0.123 | ywhag2 | -0.065 |
| irx5b | 0.118 | gap43 | -0.064 |
| pax6b | 0.118 | calm2a | -0.064 |
| homeza | 0.116 | atp6v1e1b | -0.064 |
| fzd10 | 0.115 | cplx2l | -0.064 |
| tes | 0.114 | aplp1 | -0.064 |
| XLOC-003690 | 0.114 | si:dkeyp-75h12.5 | -0.063 |
| scube2 | 0.112 | slit3 | -0.063 |
| jag1a | 0.112 | ntn1b | -0.063 |
| hoxb3a | 0.108 | zgc:65894 | -0.062 |
| neurog1 | 0.107 | stmn1b | -0.062 |