| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx20 | 0.165 | lhx1a | -0.070 |
| cd81a | 0.136 | nhlh2 | -0.064 |
| phox2bb | 0.123 | scrt1a | -0.064 |
| lmo4b | 0.119 | pax2a | -0.063 |
| flot2a | 0.117 | cdx4 | -0.063 |
| prph | 0.114 | dlb | -0.062 |
| phox2a | 0.109 | thsd7aa | -0.061 |
| cbfb | 0.101 | ebf2 | -0.060 |
| actb1 | 0.096 | hoxb9a | -0.059 |
| slit3 | 0.093 | slc6a5 | -0.056 |
| vip | 0.093 | lhx5 | -0.054 |
| ssuh2rs1 | 0.093 | apela | -0.054 |
| marcksl1a | 0.092 | hspb1 | -0.053 |
| gdf10a | 0.090 | slc30a2 | -0.053 |
| tbx2b | 0.088 | LOC100537384 | -0.053 |
| msx3 | 0.085 | npm1a | -0.053 |
| tppp2 | 0.084 | robo3 | -0.052 |
| klf6a | 0.083 | si:ch211-222l21.1 | -0.052 |
| prss35 | 0.082 | hoxa9a | -0.052 |
| nefmb | 0.080 | slc32a1 | -0.051 |
| smad1 | 0.080 | hoxb10a | -0.051 |
| erfl1 | 0.080 | bhlhe22 | -0.050 |
| tbx3a | 0.080 | uncx | -0.049 |
| nat8l | 0.079 | pax2b | -0.048 |
| col4a6 | 0.079 | spsb4a | -0.047 |
| tubb4b | 0.079 | snu13b | -0.046 |
| slc18a3a | 0.078 | lhx1b | -0.046 |
| cd82a | 0.078 | hoxd10a | -0.046 |
| chata | 0.077 | scrt2 | -0.046 |
| cnn2 | 0.077 | neurod4 | -0.045 |
| msna | 0.077 | nkx1.2lb | -0.045 |
| agrn | 0.076 | BX927258.1 | -0.045 |
| zic1 | 0.076 | insm1b | -0.044 |
| col4a5 | 0.075 | rpa2 | -0.043 |
| isl1 | 0.075 | mycn | -0.043 |