| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col9a3 | 0.145 | fabp3 | -0.054 |
| col9a1a | 0.144 | hoxb3a | -0.039 |
| col9a2 | 0.142 | meis3 | -0.037 |
| col2a1a | 0.140 | emx2 | -0.035 |
| cnmd | 0.134 | cdh2 | -0.034 |
| matn4 | 0.128 | gpm6ab | -0.032 |
| col11a1a | 0.121 | pitx2 | -0.031 |
| cthrc1a | 0.121 | zic1 | -0.031 |
| col2a1b | 0.121 | hoxb8a | -0.031 |
| col11a2 | 0.114 | gstp1 | -0.031 |
| otos | 0.112 | crabp1b | -0.030 |
| tgfbi | 0.107 | alcamb | -0.030 |
| fibina | 0.103 | fabp11a | -0.030 |
| srpx | 0.100 | cldn5a | -0.030 |
| AL929222.2 | 0.098 | XLOC-023492 | -0.030 |
| epyc | 0.097 | aldh1a2 | -0.030 |
| XLOC-035413 | 0.096 | nradd | -0.029 |
| kdelr3 | 0.095 | abracl | -0.029 |
| rcn3 | 0.093 | tuba1a | -0.029 |
| tnc | 0.090 | hoxc3a | -0.029 |
| six2a | 0.088 | tmsb4x | -0.029 |
| serpinh1b | 0.087 | atp1b4 | -0.028 |
| fkbp11 | 0.087 | vwde | -0.028 |
| zgc:153675 | 0.086 | hoxb1b | -0.028 |
| rcn1 | 0.085 | mycn | -0.028 |
| fkbp9 | 0.085 | crip1 | -0.028 |
| ckap4 | 0.085 | hand2 | -0.027 |
| ephb3a | 0.083 | zgc:56699 | -0.027 |
| fkbp7 | 0.080 | nova2 | -0.027 |
| col11a1b | 0.080 | CABZ01075068.1 | -0.027 |
| copz2 | 0.079 | rdh10a | -0.027 |
| ssr2 | 0.078 | BX469925.3 | -0.026 |
| calua | 0.078 | col5a2a | -0.026 |
| fkbp10b | 0.077 | notch3 | -0.026 |
| ssr4 | 0.077 | cspg5a | -0.026 |