| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| znf395a | 0.116 | cplx2 | -0.074 |
| zic2b | 0.115 | atp6v0cb | -0.072 |
| msx1b | 0.105 | stx1b | -0.071 |
| tpm4a | 0.102 | stxbp1a | -0.068 |
| si:dkey-42i9.4 | 0.096 | sypb | -0.068 |
| wnt11r | 0.090 | myt1b | -0.068 |
| gas1a | 0.090 | atp1b2a | -0.067 |
| cygb1 | 0.089 | sncgb | -0.066 |
| id1 | 0.088 | vamp2 | -0.065 |
| dhrs3b | 0.086 | syt2a | -0.064 |
| zic1 | 0.086 | hoxd9a | -0.064 |
| fzd10 | 0.085 | cplx2l | -0.064 |
| pax3a | 0.084 | atp1a3a | -0.061 |
| msi1 | 0.081 | hoxa9b | -0.060 |
| ccnd1 | 0.081 | jagn1a | -0.060 |
| prss35 | 0.081 | ndufa4 | -0.059 |
| XLOC-003690 | 0.081 | ywhag2 | -0.059 |
| sox3 | 0.080 | sncb | -0.058 |
| boc | 0.079 | hoxd12a | -0.058 |
| si:dkey-85k7.7 | 0.078 | kcnc3a | -0.057 |
| id3 | 0.077 | gng3 | -0.057 |
| btg2 | 0.077 | hoxa10b | -0.057 |
| zfp36l1a | 0.077 | nptna | -0.056 |
| rps3a | 0.077 | cpe | -0.056 |
| btf3 | 0.076 | tuba1a | -0.056 |
| zic3 | 0.076 | si:ch73-119p20.1 | -0.055 |
| cldn5a | 0.075 | si:ch211-214j24.9 | -0.055 |
| fthl27 | 0.074 | rtn1b | -0.055 |
| rpl7 | 0.074 | sv2a | -0.055 |
| vamp3 | 0.073 | ptmaa | -0.055 |
| selenoh | 0.073 | atp2b3a | -0.055 |
| wls | 0.073 | si:dkeyp-110a12.4 | -0.055 |
| rplp0 | 0.072 | hoxc9a | -0.055 |
| her9 | 0.072 | elavl4 | -0.054 |
| naca | 0.072 | nsfa | -0.054 |