| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msx1b | 0.269 | gpm6aa | -0.143 |
| nradd | 0.257 | ckbb | -0.122 |
| zic2b | 0.250 | rtn1a | -0.104 |
| sp5l | 0.241 | tmsb | -0.099 |
| cdx4 | 0.236 | gpm6ab | -0.092 |
| noto | 0.225 | marcksl1b | -0.091 |
| lrrc17 | 0.211 | tmsb4x | -0.089 |
| fgf8a | 0.208 | pvalb1 | -0.089 |
| wnt11r | 0.197 | fabp7a | -0.089 |
| zic2a | 0.195 | elavl3 | -0.088 |
| znfl2a | 0.189 | myt1b | -0.088 |
| hspb1 | 0.187 | rnasekb | -0.087 |
| nog1 | 0.186 | CR383676.1 | -0.087 |
| chrd | 0.168 | CU467822.1 | -0.086 |
| zic5 | 0.166 | gapdhs | -0.085 |
| nkx1.2la | 0.166 | pvalb2 | -0.084 |
| znfl1k | 0.164 | hapln1a | -0.084 |
| BX001014.2 | 0.161 | nova2 | -0.083 |
| apela | 0.161 | cotl1 | -0.080 |
| npm1a | 0.160 | stmn1b | -0.079 |
| cxcr4a | 0.159 | gnao1a | -0.077 |
| BX005254.3 | 0.158 | CU634008.1 | -0.077 |
| pou5f3 | 0.157 | tnrc6c1 | -0.077 |
| olig3 | 0.155 | si:dkeyp-75h12.5 | -0.077 |
| sall4 | 0.154 | slc1a2b | -0.076 |
| XLOC-042222 | 0.153 | zgc:165461 | -0.076 |
| cdh6 | 0.151 | actc1b | -0.076 |
| cdx1a | 0.150 | si:dkey-276j7.1 | -0.075 |
| cx43.4 | 0.150 | hbae3 | -0.074 |
| stmn1a | 0.149 | gng3 | -0.073 |
| BX927258.1 | 0.147 | gpm6bb | -0.073 |
| dut | 0.146 | elavl4 | -0.072 |
| dnase1l4.1 | 0.146 | hbbe1.3 | -0.072 |
| msx2b | 0.146 | dpysl3 | -0.072 |
| fzd10 | 0.145 | gng2 | -0.070 |