| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nkx2.4a | 0.445 | rpl37 | -0.041 |
| lft1 | 0.432 | rps10 | -0.041 |
| nkx2.1 | 0.332 | cadm3 | -0.035 |
| lft2 | 0.315 | zgc:114188 | -0.034 |
| ndr2 | 0.297 | h3f3a | -0.032 |
| nkx2.2b | 0.279 | rps17 | -0.031 |
| nkx2.9 | 0.272 | hnrnpa0l | -0.031 |
| gsc | 0.222 | ppiab | -0.030 |
| foxa | 0.193 | pvalb2 | -0.027 |
| LOC110438203 | 0.186 | si:ch1073-429i10.3.1 | -0.026 |
| dbx1a | 0.181 | mt-co2 | -0.026 |
| foxb1b | 0.174 | pax6a | -0.026 |
| shha | 0.167 | atp5f1b | -0.025 |
| nkx1.2la | 0.162 | rorb | -0.025 |
| dact2 | 0.154 | foxg1b | -0.025 |
| sox19a | 0.146 | actc1b | -0.025 |
| si:dkeyp-110a12.4 | 0.126 | COX3 | -0.025 |
| foxa2 | 0.125 | mt-atp6 | -0.024 |
| foxd5 | 0.120 | CR383676.1 | -0.024 |
| fgf3 | 0.116 | krt4 | -0.024 |
| fzd8b | 0.109 | neurod4 | -0.024 |
| foxa3 | 0.109 | pvalb1 | -0.023 |
| tdgf1 | 0.106 | pax6b | -0.023 |
| CR847971.1 | 0.103 | gpm6ab | -0.023 |
| LOC101882159 | 0.103 | cct2 | -0.023 |
| sox1a | 0.101 | ptmaa | -0.022 |
| pitx2 | 0.100 | zgc:158463 | -0.022 |
| CR847803.1 | 0.099 | ahcy | -0.021 |
| admp | 0.098 | mt-nd1 | -0.021 |
| shisa2a | 0.098 | mab21l1 | -0.020 |
| hspb1 | 0.096 | mpp6b | -0.020 |
| LOC101883520 | 0.096 | hbbe1.3 | -0.020 |
| epha4a | 0.092 | hmx1 | -0.020 |
| prdx1 | 0.091 | atp5mc1 | -0.019 |
| LOC101883163 | 0.090 | vsx2 | -0.019 |