| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbxta | 0.272 | sox3 | -0.214 |
| FP102169.1 | 0.270 | cited4b | -0.154 |
| mespab | 0.269 | cxcr4b | -0.153 |
| lhx1a | 0.266 | id1 | -0.149 |
| dkk1b | 0.262 | sox19a | -0.132 |
| msgn1 | 0.249 | zic2b | -0.118 |
| osr1 | 0.247 | asb11 | -0.116 |
| sp5a | 0.246 | inka1a | -0.109 |
| BX927327.1 | 0.245 | foxd5 | -0.105 |
| sebox | 0.235 | shisa2a | -0.104 |
| wnt11f2 | 0.233 | cxcr4a | -0.101 |
| gata5 | 0.231 | glulb | -0.099 |
| aldh1a2 | 0.227 | si:ch1073-80i24.3 | -0.097 |
| wnt5b | 0.226 | si:ch211-173m16.2 | -0.080 |
| ism1 | 0.225 | blf | -0.078 |
| ndr2 | 0.221 | sb:cb81 | -0.073 |
| gata6 | 0.218 | foxh1 | -0.072 |
| efnb2b | 0.218 | gpd1b | -0.069 |
| flrt3 | 0.215 | si:ch211-170d8.2 | -0.065 |
| aplnrb | 0.208 | zgc:64022 | -0.063 |
| efna1a | 0.207 | ccna1 | -0.063 |
| dusp4 | 0.205 | LOC101885477 | -0.062 |
| zic2a | 0.205 | sox11a | -0.062 |
| foxa | 0.201 | aldob | -0.060 |
| lft1 | 0.201 | nanog | -0.059 |
| tpbga | 0.197 | mex3b | -0.059 |
| wu:fb97g03 | 0.194 | foxd3 | -0.057 |
| fgf8a | 0.191 | epcam | -0.056 |
| pitx2 | 0.189 | si:dkey-11o15.10 | -0.056 |
| lft2 | 0.188 | nnr | -0.056 |
| zswim5 | 0.187 | serpine2 | -0.055 |
| efnb2a | 0.185 | wee2 | -0.055 |
| mespaa | 0.185 | tubb4b | -0.055 |
| irx3a | 0.185 | dnajb1b | -0.054 |
| im:7138239 | 0.183 | mkrn4 | -0.054 |