| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.325 | tuba1c | -0.094 |
| h1m | 0.316 | gpm6aa | -0.088 |
| ccna1 | 0.308 | nova2 | -0.086 |
| cldnd | 0.305 | atp6v0cb | -0.084 |
| zgc:173742 | 0.293 | rtn1a | -0.083 |
| si:dkey-68o6.5 | 0.291 | rnasekb | -0.082 |
| si:dkeyp-114g9.1 | 0.279 | gpm6ab | -0.081 |
| acp5a | 0.275 | stmn1b | -0.081 |
| nnr | 0.274 | elavl3 | -0.077 |
| cth1 | 0.267 | hbbe1.3 | -0.077 |
| zgc:100951 | 0.262 | marcksl1a | -0.076 |
| zgc:113424 | 0.261 | gng3 | -0.075 |
| avd | 0.260 | hbae3 | -0.074 |
| h2af1al | 0.255 | calm1a | -0.074 |
| zgc:77118 | 0.255 | sncb | -0.073 |
| map1lc3c | 0.252 | hbae1.1 | -0.070 |
| si:ch1073-80i24.3 | 0.247 | vamp2 | -0.070 |
| si:ch211-173m16.2 | 0.244 | si:ch1073-429i10.3.1 | -0.070 |
| pabpc1l | 0.243 | fam168a | -0.068 |
| asb11 | 0.240 | hmgb3a | -0.068 |
| pabpn1l | 0.237 | mdkb | -0.068 |
| si:dkey-228b2.6 | 0.237 | ywhag2 | -0.068 |
| mcm6l | 0.235 | elavl4 | -0.067 |
| BX005461.1 | 0.234 | stx1b | -0.067 |
| si:ch73-303b9.1 | 0.233 | atpv0e2 | -0.066 |
| wee2 | 0.233 | cspg5a | -0.066 |
| zgc:56699 | 0.233 | rtn1b | -0.066 |
| si:ch211-132b12.8 | 0.232 | tmeff1b | -0.066 |
| pou5f3 | 0.231 | tuba1a | -0.065 |
| ddx4 | 0.227 | olfm1b | -0.064 |
| gdf3 | 0.227 | snap25a | -0.064 |
| LOC101885477 | 0.226 | zgc:65894 | -0.064 |
| larp6b | 0.225 | stxbp1a | -0.064 |
| si:rp71-45k5.2 | 0.224 | sypb | -0.062 |
| s100a1 | 0.221 | atp1b2a | -0.061 |