Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| h1m | 0.157 | calm1a | -0.042 |
| nanog | 0.154 | si:ch1073-429i10.3.1 | -0.040 |
| avd | 0.146 | ccni | -0.039 |
| si:dkey-68o6.5 | 0.146 | gapdhs | -0.039 |
| nnr | 0.145 | rnasekb | -0.039 |
| si:dkeyp-114g9.1 | 0.145 | tuba1c | -0.039 |
| ccna1 | 0.143 | atp6v0cb | -0.038 |
| cldnd | 0.143 | gpm6aa | -0.037 |
| zgc:173742 | 0.142 | hbbe1.3 | -0.037 |
| pou5f3 | 0.137 | rtn1a | -0.037 |
| asb11 | 0.136 | hbae3 | -0.036 |
| si:ch1073-80i24.3 | 0.136 | atp6v1g1 | -0.035 |
| zgc:100951 | 0.134 | stmn1b | -0.035 |
| zgc:56699 | 0.133 | atp6v1e1b | -0.034 |
| zgc:77118 | 0.133 | gng3 | -0.034 |
| acp5a | 0.132 | gpm6ab | -0.033 |
| si:dkey-228b2.6 | 0.132 | hbae1.1 | -0.033 |
| BX005461.1 | 0.131 | krt4 | -0.033 |
| cth1 | 0.129 | vamp2 | -0.033 |
| zgc:113424 | 0.128 | pvalb1 | -0.032 |
| s100a1 | 0.126 | sncb | -0.032 |
| si:ch211-173m16.2 | 0.123 | marcksl1a | -0.032 |
| ddx4 | 0.122 | cyt1 | -0.031 |
| pabpc1l | 0.120 | elavl3 | -0.031 |
| larp6b | 0.119 | hbbe1.1 | -0.031 |
| tbx16 | 0.119 | nova2 | -0.031 |
| LOC101885477 | 0.117 | pvalb2 | -0.031 |
| wee2 | 0.117 | ywhag2 | -0.031 |
| map1lc3c | 0.116 | atp6ap2 | -0.030 |
| mcm6l | 0.116 | atpv0e2 | -0.030 |
| polr3gla | 0.116 | elavl4 | -0.030 |
| gdf3 | 0.115 | fam168a | -0.030 |
| h2af1al | 0.115 | olfm1b | -0.030 |
| pabpn1l | 0.115 | snap25a | -0.030 |
| si:ch211-132b12.8 | 0.115 | stx1b | -0.030 |