| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| isl2b | 0.252 | si:ch211-152c2.3 | -0.053 |
| tbx1 | 0.234 | si:dkey-16p21.8 | -0.052 |
| tcf21 | 0.216 | hspb1 | -0.052 |
| gfra3 | 0.214 | msgn1 | -0.051 |
| dlx4b | 0.207 | tbx16 | -0.051 |
| XLOC-019859 | 0.199 | rbp7b | -0.051 |
| ret | 0.188 | BX927258.1 | -0.051 |
| myhb | 0.184 | myoz1b | -0.050 |
| dlx3b | 0.183 | cdx1a | -0.049 |
| hlx1 | 0.183 | efnb2b | -0.049 |
| stc2b | 0.182 | sp5l | -0.048 |
| XLOC-007078 | 0.175 | aldob | -0.048 |
| hand2 | 0.169 | rbm38 | -0.047 |
| foxf2a | 0.168 | apoc1 | -0.046 |
| tnni2a.1 | 0.164 | si:ch211-43f4.1 | -0.045 |
| fhl2a | 0.158 | igfn1.1 | -0.044 |
| shox | 0.155 | mylpfb | -0.043 |
| fgf10b | 0.154 | serpinh1b | -0.043 |
| ociad2 | 0.151 | im:7138239 | -0.043 |
| foxf1 | 0.142 | stm | -0.042 |
| ankrd24 | 0.137 | dld | -0.042 |
| foxl2a | 0.137 | FQ323156.1 | -0.042 |
| fgd4a | 0.136 | her7 | -0.042 |
| isl1 | 0.133 | foxc1a | -0.042 |
| foxl2b | 0.131 | nr6a1a | -0.042 |
| shox2 | 0.131 | myhz1.3 | -0.042 |
| tlx1 | 0.131 | NC-002333.4 | -0.041 |
| tmeff2b | 0.130 | foxd3 | -0.041 |
| dpysl2b | 0.130 | znf648 | -0.041 |
| msc | 0.128 | tnni2a.4 | -0.040 |
| dkk3b | 0.127 | tbx16l | -0.040 |
| si:dkeyp-66d1.7 | 0.126 | dlc | -0.040 |
| unc5c | 0.126 | COX7A2 | -0.040 |
| pitx3 | 0.125 | si:ch211-255p10.3 | -0.040 |
| prdx2 | 0.125 | ryr3 | -0.040 |