| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hmx3a | 0.495 | irx5a | -0.172 |
| celsr1b | 0.262 | lmx1bb | -0.135 |
| vangl1 | 0.244 | emx2 | -0.130 |
| ctnnb2 | 0.232 | gstp1 | -0.123 |
| dag1 | 0.232 | irx3a | -0.122 |
| sfrp1a | 0.222 | irx1a | -0.120 |
| ackr3b | 0.220 | bricd5 | -0.118 |
| lmo4b | 0.219 | epha7 | -0.115 |
| itga6b | 0.213 | BX248331.2 | -0.111 |
| col28a2a | 0.211 | cetp | -0.105 |
| pcdh12 | 0.205 | si:ch211-80h18.1 | -0.104 |
| hoxb8a | 0.205 | sox1b | -0.103 |
| kera | 0.202 | nova2 | -0.100 |
| efnb3b | 0.201 | tuba1a | -0.099 |
| anos1a | 0.200 | anxa5a | -0.098 |
| gas1a | 0.196 | cspg5a | -0.098 |
| col4a5 | 0.195 | sncb | -0.098 |
| met | 0.193 | krt5 | -0.095 |
| mcama | 0.190 | pvalb8 | -0.095 |
| sept15 | 0.185 | nr2f2 | -0.094 |
| tagln2 | 0.185 | si:dkey-4p15.5 | -0.094 |
| efna2b | 0.184 | apoa2 | -0.093 |
| fat1b | 0.181 | si:ch211-153b23.5 | -0.093 |
| plpp2b | 0.178 | cyp2ad3 | -0.093 |
| hoxb5b | 0.177 | msx1b | -0.092 |
| fgf8a | 0.175 | gpm6aa | -0.092 |
| itgb6 | 0.175 | msx2b | -0.092 |
| bzw2 | 0.175 | stm | -0.092 |
| frem2a | 0.174 | BX511021.1 | -0.091 |
| pmp22a | 0.174 | atp1b1a | -0.090 |
| pax5 | 0.174 | BX927308.2 | -0.090 |
| hoxb1b | 0.172 | cpn1 | -0.089 |
| ankrd1a | 0.172 | prss35 | -0.089 |
| sash1a | 0.172 | cbln20 | -0.087 |
| tfap2a | 0.171 | zgc:55461 | -0.086 |