| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hmx3a | 0.654 | tmsb1 | -0.183 |
| sox1a | 0.272 | cfl1l | -0.140 |
| six1b | 0.268 | s100a10b | -0.138 |
| eya1 | 0.266 | pfn1 | -0.131 |
| six2b | 0.263 | krt4 | -0.129 |
| she | 0.262 | tmsb4x | -0.121 |
| prdm12b | 0.236 | capns1a | -0.121 |
| myl10 | 0.234 | anxa1a | -0.111 |
| hoxb6a | 0.196 | cotl1 | -0.109 |
| hoxb8a | 0.194 | cap1 | -0.106 |
| mcama | 0.190 | aqp3a | -0.106 |
| si:ch211-172l8.4 | 0.189 | actb1 | -0.103 |
| si:ch211-152c2.3 | 0.186 | gapdhs | -0.101 |
| sfrp1a | 0.182 | spaca4l | -0.101 |
| six4b | 0.180 | wu:fb18f06 | -0.100 |
| foxg1a | 0.175 | zgc:162730 | -0.100 |
| sox11b | 0.175 | krt91 | -0.099 |
| tagapa | 0.174 | tuba8l2 | -0.098 |
| sox3 | 0.173 | cldni | -0.098 |
| efnb3b | 0.172 | cldn1 | -0.097 |
| hhip | 0.166 | krt5 | -0.096 |
| arhgap24 | 0.166 | rac2 | -0.095 |
| six1a | 0.164 | col1a1b | -0.094 |
| si:ch211-218o21.4 | 0.162 | col1a1a | -0.092 |
| her4.1 | 0.160 | zgc:101810 | -0.092 |
| hoxb5a | 0.151 | si:dkey-102c8.3 | -0.091 |
| si:dkey-42i9.4 | 0.151 | col11a1a | -0.089 |
| sdk1b | 0.149 | ecrg4b | -0.089 |
| XLOC-003692 | 0.148 | pycard | -0.087 |
| her15.1 | 0.148 | krtt1c19e | -0.087 |
| igsf9a | 0.145 | rbp4 | -0.087 |
| fzd4 | 0.144 | cebpd | -0.086 |
| marcksl1b | 0.144 | zgc:86896 | -0.086 |
| sash1a | 0.144 | hbegfa | -0.085 |
| eya2 | 0.141 | zgc:153284 | -0.085 |