Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nnr | 0.185 | calm1a | -0.061 |
| pou5f3 | 0.185 | si:ch1073-429i10.3.1 | -0.059 |
| si:dkeyp-114g9.1 | 0.182 | ccni | -0.056 |
| s100a1 | 0.179 | gapdhs | -0.056 |
| si:dkey-68o6.5 | 0.175 | rnasekb | -0.056 |
| si:ch1073-80i24.3 | 0.171 | tuba1c | -0.056 |
| h1m | 0.170 | atp6v0cb | -0.054 |
| asb11 | 0.168 | gpm6aa | -0.054 |
| nanog | 0.168 | hbbe1.3 | -0.053 |
| zgc:56699 | 0.168 | rtn1a | -0.053 |
| polr3gla | 0.165 | hbae3 | -0.052 |
| si:ch211-173m16.2 | 0.160 | atp6v1g1 | -0.050 |
| avd | 0.159 | stmn1b | -0.050 |
| tbx16 | 0.158 | atp6v1e1b | -0.049 |
| ddx4 | 0.156 | gng3 | -0.049 |
| si:dkey-228b2.6 | 0.156 | hbae1.1 | -0.048 |
| stm | 0.153 | marcksl1a | -0.048 |
| cldnd | 0.152 | gpm6ab | -0.047 |
| ccna1 | 0.151 | pvalb1 | -0.047 |
| lrwd1 | 0.151 | krt4 | -0.046 |
| LOC100008030 | 0.145 | pvalb2 | -0.046 |
| zgc:77118 | 0.145 | sncb | -0.046 |
| cth1 | 0.143 | vamp2 | -0.046 |
| si:ch73-303b9.1 | 0.142 | elavl3 | -0.045 |
| mcm6l | 0.139 | atp6ap2 | -0.044 |
| zgc:173742 | 0.138 | cyt1 | -0.044 |
| LOC101885477 | 0.137 | hbbe1.1 | -0.044 |
| zgc:100951 | 0.136 | nova2 | -0.044 |
| BX005461.1 | 0.135 | ywhag2 | -0.044 |
| LOC101885485 | 0.135 | atpv0e2 | -0.043 |
| vrtn | 0.135 | elavl4 | -0.043 |
| polr2gl | 0.134 | snap25a | -0.043 |
| pabpc1l | 0.133 | stx1b | -0.043 |
| si:dkey-66i24.9 | 0.133 | wu:fb55g09 | -0.043 |
| foxh1 | 0.132 | fam168a | -0.042 |