Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| rtf1 | 0.078 | eef1a1l1 | -0.058 |
| baz1b | 0.078 | hmgb3a | -0.052 |
| XLOC-042341 | 0.077 | rps20 | -0.047 |
| hdgfl2 | 0.076 | mt-co2 | -0.044 |
| slu7 | 0.075 | id1 | -0.042 |
| nanog | 0.074 | fthl27 | -0.041 |
| LOC110438556 | 0.073 | rps6 | -0.040 |
| igf3 | 0.072 | rps19 | -0.039 |
| si:ch73-22a13.3 | 0.072 | NC-002333.4 | -0.039 |
| si:dkey-112a7.5 | 0.070 | kras | -0.039 |
| BX324212.1 | 0.069 | hmgb2a | -0.039 |
| pho | 0.069 | myl12.1 | -0.039 |
| nrn1la | 0.068 | mt-nd5 | -0.039 |
| si:ch211-161h7.4 | 0.068 | rplp0 | -0.038 |
| tmed2 | 0.068 | hspa8 | -0.037 |
| si:dkeyp-80d11.4 | 0.067 | her7 | -0.036 |
| si:dkey-33c12.4 | 0.067 | CR376838.1 | -0.036 |
| ppa1a | 0.067 | naca | -0.035 |
| alyref | 0.065 | pdhb | -0.034 |
| nfil3-2 | 0.065 | anp32e | -0.034 |
| ide | 0.065 | snrpd2 | -0.034 |
| FP074874.3 | 0.065 | rps7 | -0.034 |
| si:dkeyp-4c4.2 | 0.064 | npm1a | -0.034 |
| npc2 | 0.064 | rps5 | -0.033 |
| cth1 | 0.064 | ybx1 | -0.033 |
| tent4b | 0.064 | rpsa | -0.032 |
| taf2 | 0.063 | sall1a | -0.032 |
| gtf2f1 | 0.063 | si:ch211-262h13.3 | -0.032 |
| zmat2 | 0.063 | rpl11 | -0.032 |
| si:ch73-299h12.2 | 0.063 | ncl | -0.032 |
| si:dkey-67c22.2 | 0.063 | XLOC-016582 | -0.031 |
| ptena | 0.062 | BX927258.1 | -0.031 |
| ctbp1 | 0.062 | aldob | -0.031 |
| slc43a3b | 0.062 | rbm8a | -0.030 |
| dnajc1 | 0.062 | nifk | -0.030 |