| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cnpy1 | 0.346 | nr2f1a | -0.047 |
| en1b | 0.344 | gpm6aa | -0.045 |
| pax5 | 0.301 | nr2f2 | -0.037 |
| en2a | 0.285 | marcksl1b | -0.036 |
| en2b | 0.244 | sncb | -0.035 |
| atoh1b | 0.194 | atp6v0cb | -0.035 |
| slf1 | 0.175 | hoxb3a | -0.035 |
| atoh1a | 0.155 | stx1b | -0.034 |
| ism1 | 0.139 | gng3 | -0.034 |
| il17rd | 0.138 | gpm6ab | -0.033 |
| fgf8a | 0.134 | stxbp1a | -0.033 |
| msx1b | 0.124 | snap25a | -0.032 |
| pax2a | 0.115 | si:ch211-152c2.3 | -0.031 |
| olig3 | 0.115 | NC-002333.4 | -0.031 |
| fgf8b | 0.113 | map1aa | -0.030 |
| ism2a | 0.107 | tmem59l | -0.030 |
| pax2b | 0.097 | elavl4 | -0.030 |
| zcchc7 | 0.091 | vamp2 | -0.030 |
| her12 | 0.090 | gabrb4 | -0.030 |
| fgf4 | 0.080 | ek1 | -0.029 |
| efna2a | 0.079 | nova1 | -0.029 |
| msx3 | 0.078 | sv2a | -0.029 |
| zic5 | 0.078 | zgc:153426 | -0.029 |
| spry4 | 0.078 | atp1a3a | -0.029 |
| efna5b | 0.077 | ywhag2 | -0.029 |
| olfml2bb | 0.077 | raraa | -0.029 |
| pax8 | 0.076 | islr2 | -0.029 |
| atoh8 | 0.074 | ckbb | -0.029 |
| mir135b | 0.074 | apoeb | -0.028 |
| masp1 | 0.073 | atp6v1e1b | -0.028 |
| her15.1 | 0.072 | fgfr3 | -0.028 |
| st8sia2 | 0.070 | pacsin1a | -0.028 |
| im:7152348 | 0.069 | zgc:65894 | -0.028 |
| her4.1 | 0.069 | tmem178b | -0.028 |
| XLOC-002952 | 0.068 | xpr1a | -0.028 |