| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc13b | 0.189 | fgfbp2b | -0.126 |
| hoxc13a | 0.183 | barx1 | -0.105 |
| ca6 | 0.169 | dlx5a | -0.097 |
| postnb | 0.165 | si:ch211-156j16.1 | -0.094 |
| crabp1b | 0.163 | sox9a | -0.090 |
| hoxb13a | 0.156 | matn1 | -0.088 |
| ccl25b | 0.151 | gsc | -0.085 |
| pmp22a | 0.151 | col11a2 | -0.084 |
| zmp:0000000846 | 0.148 | fgfr3 | -0.084 |
| krt18b | 0.147 | ucmab | -0.084 |
| fap | 0.146 | ecrg4a | -0.083 |
| dcn | 0.143 | hand2 | -0.082 |
| tnxbb | 0.136 | col9a3 | -0.080 |
| marcksl1a | 0.135 | col9a2 | -0.079 |
| gstt1a | 0.134 | col2a1a | -0.079 |
| lrrc17 | 0.131 | foxf2a | -0.078 |
| myoc | 0.130 | wwp2 | -0.078 |
| cd82a | 0.129 | dlx4a | -0.076 |
| hoxc12b | 0.129 | dlx3b | -0.073 |
| tnn | 0.128 | mia | -0.072 |
| vwde | 0.128 | acana | -0.072 |
| wls | 0.126 | col9a1a | -0.072 |
| akap12b | 0.126 | dlx2a | -0.071 |
| dmrt2a | 0.125 | dlx1a | -0.070 |
| hoxc11a | 0.124 | tnxba | -0.070 |
| six1b | 0.124 | snorc | -0.068 |
| ccdc80l2 | 0.124 | ifitm1 | -0.068 |
| boc | 0.122 | epyc | -0.067 |
| hoxd12a | 0.121 | col11a1a | -0.067 |
| LOC100535130 | 0.121 | hapln1b | -0.067 |
| csf1b | 0.116 | wisp3 | -0.065 |
| col5a2a | 0.116 | dlx4b | -0.064 |
| fmoda | 0.116 | zgc:153704 | -0.064 |
| si:ch211-286o17.1 | 0.115 | si:dkey-19b23.8 | -0.063 |
| kera | 0.115 | foxf1 | -0.062 |