Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgl1 | 0.259 | si:ch211-137a8.4 | -0.033 |
| vwde | 0.204 | tuba1a | -0.029 |
| si:ch211-43f4.1 | 0.174 | hmgb3b | -0.027 |
| fbln7 | 0.169 | nova2 | -0.027 |
| col5a2a | 0.164 | tuba1c | -0.027 |
| pdgfrl | 0.158 | apex1 | -0.026 |
| si:ch211-287a12.9 | 0.158 | XLOC-003690 | -0.026 |
| col1a1b | 0.156 | mdkb | -0.025 |
| postnb | 0.152 | sox11b | -0.025 |
| si:ch1073-459j12.1 | 0.149 | c1qbp | -0.024 |
| col1a2 | 0.147 | hmgb1b | -0.024 |
| fmoda | 0.147 | setb | -0.024 |
| fap | 0.146 | si:dkey-56m19.5 | -0.024 |
| csf1b | 0.145 | sox3 | -0.024 |
| zmp:0000000846 | 0.141 | ddx39ab | -0.023 |
| hhla2a.1 | 0.140 | XLOC-003689 | -0.023 |
| cilp | 0.139 | cct7 | -0.022 |
| col5a1 | 0.139 | hes6 | -0.022 |
| col6a1 | 0.138 | msi1 | -0.022 |
| ccdc3a | 0.135 | mycn | -0.022 |
| col6a3 | 0.135 | top1l | -0.022 |
| col21a1 | 0.133 | XLOC-003692 | -0.022 |
| col6a2 | 0.133 | her15.1 | -0.022 |
| emp2 | 0.132 | chd4a | -0.021 |
| dmrt2a | 0.130 | cldn5a | -0.021 |
| tgm2b | 0.129 | fabp7a | -0.021 |
| ccdc80l2 | 0.127 | gpm6aa | -0.021 |
| fkbp10b | 0.127 | hdac1 | -0.021 |
| col1a1a | 0.124 | lsm6 | -0.021 |
| tril | 0.123 | rcc2 | -0.021 |
| col16a1 | 0.122 | rtn1a | -0.021 |
| si:dkey-238c7.16 | 0.121 | si:dkey-276j7.1 | -0.021 |
| tnn | 0.121 | snrpe | -0.021 |
| zgc:113307 | 0.120 | snrpf | -0.021 |
| fkbp14 | 0.118 | her4.2 | -0.021 |