| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| otx2b | 0.357 | meis2b | -0.068 |
| sox14 | 0.251 | hoxb3a | -0.066 |
| tal2 | 0.251 | nrn1a | -0.059 |
| zfpm2b | 0.250 | gap43 | -0.058 |
| tal1 | 0.231 | adcyap1b | -0.054 |
| pax7a | 0.200 | meis1b | -0.049 |
| pcp4l1 | 0.177 | tmsb | -0.048 |
| mir181b-3 | 0.175 | pcna | -0.048 |
| rorab | 0.171 | vat1 | -0.048 |
| pax7b | 0.167 | robo3 | -0.047 |
| slc6a1b | 0.160 | nr2f6b | -0.046 |
| emx2 | 0.158 | islr2 | -0.044 |
| zfpm2a | 0.151 | stmn1a | -0.044 |
| crabp1a | 0.142 | epha4b | -0.043 |
| XLOC-003678 | 0.139 | nell2b | -0.043 |
| tfap2e | 0.132 | chaf1a | -0.042 |
| gata3 | 0.131 | npm1a | -0.042 |
| otx1 | 0.125 | alcamb | -0.042 |
| uncx | 0.124 | nhlh2 | -0.042 |
| znf385a | 0.119 | onecut1 | -0.042 |
| nfixb | 0.119 | hoxd4a | -0.041 |
| lmo1 | 0.116 | hoxa3a | -0.041 |
| dmbx1a | 0.116 | si:ch211-152c2.3 | -0.041 |
| znf296 | 0.112 | eif5a2 | -0.040 |
| LOC103909284 | 0.111 | fbl | -0.040 |
| satb1b | 0.109 | tuba8l3 | -0.040 |
| emid1 | 0.108 | gbx1 | -0.040 |
| sox12 | 0.108 | lig1 | -0.040 |
| hs3st1l2 | 0.106 | dkc1 | -0.040 |
| nxph2b | 0.103 | tuba8l4 | -0.040 |
| BX649529.1 | 0.102 | akap12b | -0.040 |
| si:dkey-30j16.3 | 0.101 | nop10 | -0.040 |
| slc32a1 | 0.101 | dscaml1 | -0.040 |
| calb2b | 0.098 | hoxd3a | -0.040 |
| BX247868.1 | 0.097 | robo1 | -0.040 |