Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| crabp1b | 0.080 | hmgb2a | -0.025 |
| pax2a | 0.077 | si:ch73-281n10.2 | -0.023 |
| skor1a | 0.075 | id1 | -0.023 |
| pax8 | 0.073 | msna | -0.021 |
| si:dkey-175g6.2 | 0.070 | pcna | -0.021 |
| lbx1a | 0.069 | ranbp1 | -0.020 |
| skor1b | 0.068 | anp32a | -0.019 |
| robo3 | 0.066 | sox3 | -0.019 |
| gbx1 | 0.066 | anp32b | -0.018 |
| klhl14 | 0.062 | sox19a | -0.018 |
| slc30a2 | 0.060 | ccnd1 | -0.018 |
| pax2b | 0.060 | banf1 | -0.017 |
| XLOC-005615 | 0.059 | mcm7 | -0.017 |
| BX005256.1 | 0.059 | chaf1a | -0.017 |
| hoxc4a | 0.055 | cldn5a | -0.017 |
| XLOC-023447 | 0.051 | mki67 | -0.017 |
| hoxb3a | 0.048 | stmn1a | -0.017 |
| scrt1a | 0.048 | XLOC-003690 | -0.017 |
| cx32.2 | 0.048 | dut | -0.017 |
| mab21l2 | 0.045 | lig1 | -0.017 |
| znf385c | 0.044 | msi1 | -0.016 |
| slc6a5 | 0.041 | XLOC-003689 | -0.016 |
| LOC101883600 | 0.041 | rrm1 | -0.016 |
| gdf11 | 0.040 | selenoh | -0.016 |
| zgc:162707 | 0.039 | rpa3 | -0.016 |
| thsd7aa | 0.039 | notch3 | -0.016 |
| kazna | 0.039 | nutf2l | -0.016 |
| zgc:153395 | 0.039 | nop58 | -0.016 |
| mab21l1 | 0.038 | nop56 | -0.016 |
| lhx5 | 0.038 | XLOC-003692 | -0.016 |
| atcaya | 0.038 | rsl1d1 | -0.015 |
| lhx1a | 0.038 | mcm6 | -0.015 |
| fkbp1ab | 0.038 | COX7A2 (1 of many) | -0.015 |
| foxb2 | 0.038 | tuba8l | -0.015 |
| si:dkey-19a16.16 | 0.037 | ccna2 | -0.015 |