Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax2a | 0.060 | ahcy | -0.012 |
| slc30a2 | 0.056 | aldob | -0.012 |
| si:dkey-175g6.2 | 0.055 | eef1da | -0.012 |
| pax8 | 0.054 | msna | -0.012 |
| lbx1a | 0.053 | cd82a | -0.011 |
| pax2b | 0.049 | sox19a | -0.011 |
| XLOC-005615 | 0.047 | banf1 | -0.010 |
| skor1b | 0.045 | ccnd1 | -0.010 |
| skor1a | 0.044 | lig1 | -0.010 |
| klhl14 | 0.042 | msi1 | -0.010 |
| robo3 | 0.042 | pcna | -0.010 |
| LOC100330246 | 0.036 | rpa3 | -0.010 |
| scrt1a | 0.035 | sb:cb81 | -0.010 |
| hoxc4a | 0.034 | sox3 | -0.010 |
| nhlh2 | 0.034 | stmn1a | -0.010 |
| crabp1b | 0.033 | anp32b | -0.009 |
| slc6a5 | 0.033 | cast | -0.009 |
| jagn1a | 0.032 | cdca7a | -0.009 |
| LOC110439812 | 0.032 | chaf1a | -0.009 |
| nkx2.7 | 0.032 | cldn5a | -0.009 |
| si:dkey-280e21.3 | 0.032 | dek | -0.009 |
| slc32a1 | 0.032 | fbxo5 | -0.009 |
| gbx1 | 0.031 | id1 | -0.009 |
| thsd7aa | 0.031 | mgst1.2 | -0.009 |
| atcaya | 0.030 | mki67 | -0.009 |
| elavl3 | 0.029 | si:ch211-156b7.4 | -0.009 |
| lhx1a | 0.029 | tuba8l | -0.009 |
| lhx5 | 0.029 | XLOC-003690 | -0.009 |
| sh2d4ba | 0.029 | zgc:193505 | -0.009 |
| tmeff1b | 0.029 | aep1 | -0.008 |
| adam22 | 0.028 | anxa1a | -0.008 |
| eps8b | 0.028 | anxa1c | -0.008 |
| hoxb3a | 0.028 | ccna2 | -0.008 |
| kazna | 0.028 | cdca7b | -0.008 |
| mab21l2 | 0.028 | ddx18 | -0.008 |