Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| csf3a | 0.196 | sox3 | -0.106 |
| zgc:153118 | 0.189 | cxcr4b | -0.102 |
| ckmt2a | 0.170 | id1 | -0.077 |
| si:ch211-226h7.5 | 0.168 | sox19a | -0.064 |
| cldnc | 0.166 | cited4b | -0.059 |
| her8.2 | 0.166 | zic2b | -0.058 |
| cahz | 0.158 | cxcr4a | -0.058 |
| LOC110439537 | 0.156 | inka1a | -0.058 |
| CT737210.1 | 0.156 | stmn1a | -0.048 |
| BX927327.1 | 0.151 | foxd5 | -0.048 |
| CR381686.2 | 0.148 | asb11 | -0.047 |
| wnt11f2 | 0.143 | shisa2a | -0.047 |
| lhx1b | 0.140 | sb:cb81 | -0.046 |
| cldna | 0.137 | eif3s10 | -0.045 |
| tbxta | 0.135 | atp1a1a.1 | -0.041 |
| plekha6 | 0.135 | nasp | -0.040 |
| bicc2 | 0.134 | pprc1 | -0.038 |
| fshr | 0.133 | si:dkey-56m19.5 | -0.038 |
| osr1 | 0.129 | zgc:64022 | -0.037 |
| cyp27c1 | 0.128 | si:ch211-170d8.2 | -0.037 |
| otol1b | 0.128 | rpa3 | -0.036 |
| prr15la | 0.127 | aldob | -0.036 |
| msgn1 | 0.126 | rab11fip1b | -0.035 |
| si:dkey-247k7.2 | 0.125 | hmgb2a | -0.035 |
| si:ch73-103b9.2 | 0.123 | uri1 | -0.035 |
| FP102169.1 | 0.122 | metrnla | -0.035 |
| si:dkey-211f22.5 | 0.122 | sox2 | -0.035 |
| AL590151.2 | 0.122 | snai2 | -0.034 |
| pitx2 | 0.119 | atf7ip | -0.034 |
| cdk21 | 0.119 | tpx2 | -0.034 |
| LOC108179246 | 0.117 | gpd1b | -0.034 |
| mespab | 0.117 | rps27l | -0.033 |
| lhx1a | 0.117 | mex3b | -0.033 |
| si:ch211-173d10.4 | 0.116 | glulb | -0.033 |
| aplnrb | 0.116 | zgc:100951 | -0.033 |