Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx16 | 0.171 | calm1a | -0.038 |
| msgn1 | 0.161 | si:ch1073-429i10.3.1 | -0.037 |
| mespab | 0.151 | tuba1c | -0.036 |
| im:7138239 | 0.149 | ccni | -0.035 |
| tbx16l | 0.133 | gapdhs | -0.034 |
| si:dkeyp-2e4.3 | 0.132 | gpm6aa | -0.033 |
| vrtn | 0.131 | hbbe1.3 | -0.033 |
| wu:fb97g03 | 0.129 | rnasekb | -0.033 |
| BX927327.1 | 0.123 | rtn1a | -0.033 |
| tbxta | 0.123 | marcksl1a | -0.033 |
| snai1a | 0.118 | atp6v0cb | -0.032 |
| sp5l | 0.118 | atp6v1e1b | -0.032 |
| LOC100008030 | 0.116 | hbae3 | -0.032 |
| XLOC-041707 | 0.107 | atp6v1g1 | -0.031 |
| cdx1a | 0.106 | stmn1b | -0.031 |
| cdx4 | 0.105 | ckbb | -0.030 |
| rbm38 | 0.104 | fabp3 | -0.030 |
| mespaa | 0.103 | pvalb1 | -0.030 |
| ndr2 | 0.102 | wu:fb55g09 | -0.030 |
| si:dkey-261j4.5 | 0.102 | cyt1 | -0.029 |
| cmtm6 | 0.101 | elavl3 | -0.029 |
| ved | 0.101 | gng3 | -0.029 |
| XLOC-016582 | 0.101 | hbae1.1 | -0.029 |
| vox | 0.100 | krt4 | -0.029 |
| XLOC-015209 | 0.098 | mdkb | -0.029 |
| cyp27c1 | 0.097 | nova2 | -0.029 |
| ddx4 | 0.096 | pvalb2 | -0.029 |
| hspb1 | 0.096 | gpm6ab | -0.028 |
| efnb2b | 0.095 | sncb | -0.028 |
| eve1 | 0.095 | vamp2 | -0.028 |
| lft1 | 0.094 | fam168a | -0.027 |
| wnt11f2 | 0.092 | gabarapl2 | -0.027 |
| ca9 | 0.089 | gnb1a | -0.027 |
| stm | 0.089 | hbbe1.1 | -0.027 |
| vent | 0.089 | prdx2 | -0.027 |