| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| barhl1b | 0.384 | id1 | -0.117 |
| barhl2 | 0.346 | pcna | -0.115 |
| lhx9 | 0.330 | sox3 | -0.104 |
| lef1 | 0.277 | msna | -0.101 |
| pou4f1 | 0.219 | hmgb2a | -0.100 |
| shox | 0.217 | selenoh | -0.098 |
| ebf3a | 0.212 | chaf1a | -0.098 |
| lhx2b | 0.208 | npm1a | -0.097 |
| ebf1a | 0.199 | banf1 | -0.097 |
| scrt1b | 0.199 | anp32b | -0.097 |
| nrn1a | 0.192 | ccnd1 | -0.093 |
| pou4f2 | 0.183 | sox19a | -0.091 |
| ctnnbip1 | 0.182 | lig1 | -0.090 |
| zgc:158291 | 0.173 | rrm1 | -0.090 |
| mab21l1 | 0.172 | ranbp1 | -0.089 |
| pou3f1 | 0.170 | dut | -0.089 |
| roraa | 0.169 | tuba8l | -0.089 |
| gpm6ab | 0.164 | nop10 | -0.089 |
| ebf1b | 0.158 | nop58 | -0.088 |
| fez1 | 0.157 | stmn1a | -0.086 |
| adcyap1b | 0.156 | rpa3 | -0.086 |
| stmn1b | 0.152 | mki67 | -0.086 |
| tfap2d | 0.151 | akap12b | -0.086 |
| elavl3 | 0.147 | mcm6 | -0.086 |
| mab21l2 | 0.146 | vamp3 | -0.085 |
| tcf7l2 | 0.145 | snu13b | -0.085 |
| ptmaa | 0.144 | dkc1 | -0.085 |
| cbfa2t3 | 0.137 | ccng1 | -0.084 |
| ldb2b | 0.130 | cdca7b | -0.084 |
| pbx3b | 0.129 | nutf2l | -0.084 |
| celf2 | 0.129 | dek | -0.084 |
| lmo3 | 0.128 | fen1 | -0.083 |
| thsd7aa | 0.127 | aldoaa | -0.083 |
| rtn1a | 0.126 | fbl | -0.083 |
| chd4a | 0.125 | sdc4 | -0.083 |