| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| fgf3 | 0.128 | hsp90aa1.1 | -0.076 |
| thbs2a | 0.118 | rps12 | -0.062 |
| gdf11 | 0.113 | rps20 | -0.061 |
| cyp26a1 | 0.112 | si:dkey-151g10.6 | -0.061 |
| tbxta | 0.108 | myog | -0.058 |
| hoxd12a | 0.105 | rplp1 | -0.056 |
| hoxa13b | 0.103 | rps28 | -0.055 |
| tagln3b | 0.101 | rpl29 | -0.054 |
| tll1 | 0.099 | jam2a | -0.054 |
| fgf8a | 0.097 | rpl36a | -0.052 |
| hoxd10a | 0.096 | rplp2l | -0.051 |
| bmp2a | 0.089 | rpl36 | -0.051 |
| itm2cb | 0.089 | zgc:92429 | -0.051 |
| dand5 | 0.086 | rpl38 | -0.051 |
| depdc7a | 0.085 | si:ch211-131k2.3 | -0.048 |
| tbxtb | 0.085 | rps29 | -0.048 |
| hoxb10a | 0.083 | klhl41b | -0.047 |
| hoxc13b | 0.081 | rpl39 | -0.047 |
| hoxa11a | 0.080 | unc45b | -0.046 |
| her7 | 0.077 | cygb1 | -0.046 |
| hes6 | 0.076 | tmsb | -0.045 |
| zgc:162939 | 0.074 | hint1 | -0.045 |
| vox | 0.074 | aktip | -0.045 |
| her12 | 0.074 | smyd1b | -0.045 |
| b3gnt7l | 0.073 | fbxl22 | -0.045 |
| nradd | 0.073 | tnni2b.1 | -0.044 |
| enc3 | 0.072 | zgc:101853 | -0.044 |
| greb1 | 0.072 | fxr2 | -0.043 |
| prickle1b | 0.071 | mef2d | -0.043 |
| sall4 | 0.071 | rps19 | -0.043 |
| fgf20a | 0.069 | tcf15 | -0.043 |
| sp5l | 0.069 | zbtb18 | -0.043 |
| hoxd13a | 0.068 | cpn1 | -0.043 |
| wnt3a | 0.068 | rps9 | -0.042 |
| abcc6a | 0.068 | myca | -0.042 |