Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col6a3 | 0.164 | hmga1a | -0.104 |
| col6a2 | 0.155 | si:ch211-222l21.1 | -0.097 |
| BX663503.3 | 0.145 | h2afvb | -0.092 |
| CABZ01092746.1 | 0.145 | hmgb2b | -0.085 |
| col6a1 | 0.138 | rplp2l | -0.083 |
| col6a4a | 0.135 | snrpf | -0.082 |
| abi3bpb | 0.131 | hnrnpabb | -0.082 |
| col5a2a | 0.131 | khdrbs1a | -0.081 |
| rbp4 | 0.130 | hnrnpaba | -0.081 |
| abi3bpa | 0.130 | snrpd1 | -0.081 |
| col1a1b | 0.123 | ptmab | -0.081 |
| slc51a | 0.118 | ddx39ab | -0.080 |
| krt15 | 0.117 | rps12 | -0.079 |
| nr5a2 | 0.115 | snrpg | -0.078 |
| vim | 0.113 | snrpb | -0.078 |
| ptgdsb.2 | 0.113 | idh2 | -0.078 |
| adamts15a | 0.112 | hnrnpa0b | -0.078 |
| rgs5a | 0.110 | snrpd2 | -0.078 |
| col5a1 | 0.105 | tubb2b | -0.078 |
| s100v2 | 0.104 | hnrnpa0l | -0.077 |
| postna | 0.103 | si:dkey-151g10.6 | -0.076 |
| fstl1b | 0.103 | cfl1 | -0.075 |
| col1a2 | 0.103 | snrpe | -0.074 |
| krt91 | 0.103 | ptges3b | -0.074 |
| hpdb | 0.102 | h2afva | -0.074 |
| asip2b | 0.101 | h3f3a | -0.071 |
| tnfaip6 | 0.100 | rps20 | -0.071 |
| ptprda | 0.098 | apex1 | -0.071 |
| ifitm1 | 0.097 | hmgn2 | -0.071 |
| CR383676.1 | 0.095 | cthrc1a | -0.070 |
| col1a1a | 0.095 | hmgb2a | -0.069 |
| gsc | 0.094 | setb | -0.069 |
| col12a1b | 0.094 | ran | -0.069 |
| lum | 0.094 | rpl21 | -0.068 |
| twist2 | 0.093 | cirbpa | -0.068 |