Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LO018508.1 | 0.187 | sumo3a | -0.020 |
| col5a2a | 0.164 | ddx39ab | -0.020 |
| ms4a17a.7 | 0.155 | ptmab | -0.020 |
| dcn | 0.153 | hmgb2a | -0.018 |
| col6a1 | 0.153 | h2afva | -0.018 |
| col6a4a | 0.149 | hmga1a | -0.018 |
| col6a2 | 0.148 | cirbpb | -0.017 |
| CABZ01092746.1 | 0.140 | magoh | -0.017 |
| col6a3 | 0.140 | snrpd1 | -0.016 |
| col5a1 | 0.138 | hmgn6 | -0.016 |
| pmp22a | 0.136 | rrm1 | -0.016 |
| si:dkey-12l12.1 | 0.135 | seta | -0.016 |
| vstm4a | 0.126 | snrpd2 | -0.016 |
| col12a1a | 0.125 | pax6a | -0.015 |
| lum | 0.123 | lbr | -0.015 |
| ifitm1 | 0.122 | ilf2 | -0.015 |
| ptx3a | 0.120 | psma3 | -0.015 |
| rhag | 0.120 | hnrnpa0b | -0.015 |
| si:ch1073-291c23.2 | 0.119 | snrpf | -0.014 |
| si:ch1073-459j12.1 | 0.119 | CABZ01005379.1 | -0.014 |
| fap | 0.119 | smarcd1 | -0.014 |
| barx1 | 0.117 | snrpe | -0.014 |
| twist2 | 0.116 | snrpg | -0.014 |
| hand2 | 0.114 | snrpb | -0.014 |
| olfml3b | 0.114 | smc1al | -0.014 |
| col1a2 | 0.114 | sinhcafl | -0.014 |
| serpinf1 | 0.114 | hdac1 | -0.014 |
| CU929237.1 | 0.113 | max | -0.013 |
| fstl3 | 0.112 | si:ch211-288g17.3 | -0.013 |
| tmem176 | 0.110 | hnrnpaba | -0.013 |
| dlx4a | 0.110 | ldb1a | -0.013 |
| prelp | 0.110 | baz1a | -0.013 |
| fbln5 | 0.108 | si:ch211-51e12.7 | -0.013 |
| ms4a17a.9 | 0.107 | hes2.2 | -0.013 |
| krt8 | 0.107 | zgc:110216 | -0.013 |