Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| bgna | 0.192 | hlx1 | -0.116 |
| htra1a | 0.179 | XLOC-041870 | -0.113 |
| elnb | 0.176 | si:ch211-222l21.1 | -0.111 |
| loxl5b | 0.175 | rpl23 | -0.098 |
| col1a1a | 0.170 | ddx39ab | -0.098 |
| fbln5 | 0.165 | si:ch73-1a9.3 | -0.097 |
| wnt6a | 0.164 | hmgn2 | -0.096 |
| BX663503.3 | 0.161 | rpl37 | -0.095 |
| loxl1 | 0.156 | ran | -0.094 |
| col1a2 | 0.150 | hmga1a | -0.094 |
| chpfb | 0.145 | rpl7a | -0.093 |
| slc2a1b | 0.145 | rps14 | -0.091 |
| ncf4 | 0.145 | snrpf | -0.091 |
| slc16a3 | 0.144 | snrpb | -0.089 |
| loxa | 0.144 | nkx2.3 | -0.089 |
| si:dkey-164f24.2 | 0.143 | XLOC-028370 | -0.088 |
| mical2a | 0.142 | si:ch211-62a1.3 | -0.086 |
| wnt11r | 0.141 | snrpg | -0.086 |
| sparc | 0.139 | srsf3b | -0.085 |
| nid1a | 0.138 | rps7 | -0.085 |
| pkma | 0.138 | hnrnpabb | -0.084 |
| si:ch211-1a19.3 | 0.137 | rpl10a | -0.084 |
| kcnj12a | 0.135 | rpl35 | -0.083 |
| pfkfb3 | 0.135 | atp5f1d | -0.083 |
| hk1 | 0.132 | rps9 | -0.083 |
| sema3bl | 0.132 | snrpd1 | -0.081 |
| col11a1b | 0.131 | snrpd2 | -0.081 |
| coq8a | 0.130 | h2afvb | -0.080 |
| col6a4a | 0.130 | sub1a | -0.080 |
| tmprss12 | 0.130 | hmgb3a | -0.080 |
| nupr1b | 0.130 | hnrnpaba | -0.079 |
| LOC110438722 | 0.130 | rpl11 | -0.079 |
| si:dkey-23a13.2 | 0.129 | rps5 | -0.078 |
| im:7151449 | 0.128 | ptges3b | -0.078 |
| vim | 0.127 | rpl13a | -0.078 |