Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-21p1.3 | 0.213 | snrpf | -0.049 |
| si:dkey-1j5.4 | 0.212 | ddx39ab | -0.048 |
| matn3a | 0.194 | snrpd1 | -0.047 |
| chad | 0.190 | apex1 | -0.045 |
| matn3b | 0.190 | marcksb | -0.045 |
| zgc:113232 | 0.179 | snrpb | -0.045 |
| si:dkey-234i14.3 | 0.178 | fabp3 | -0.044 |
| si:dkey-12l12.1 | 0.177 | snrpd2 | -0.044 |
| cmn | 0.176 | snrpe | -0.044 |
| zmp:0000000760 | 0.176 | seta | -0.042 |
| si:ch73-23l24.1 | 0.166 | si:ch211-137a8.4 | -0.042 |
| igsf10 | 0.163 | alyref | -0.041 |
| susd5 | 0.161 | ilf2 | -0.041 |
| col9a1b | 0.156 | snrpg | -0.041 |
| col6a3 | 0.155 | ptges3b | -0.040 |
| loxl1 | 0.153 | cbx3a | -0.039 |
| ucmab | 0.152 | setb | -0.039 |
| gas2b | 0.150 | h2afva | -0.038 |
| wfdc2 | 0.148 | psmb7 | -0.038 |
| zgc:175280 | 0.148 | si:ch211-288g17.3 | -0.038 |
| si:ch211-13f8.2 | 0.147 | smarce1 | -0.038 |
| epyc | 0.146 | her15.1 | -0.038 |
| si:dkey-31g6.6 | 0.145 | hdac1 | -0.037 |
| col6a2 | 0.144 | ddx39aa | -0.036 |
| col6a4a | 0.140 | hmgb1b | -0.036 |
| CABZ01092746.1 | 0.139 | magoh | -0.036 |
| ehd2b | 0.139 | sf3b5 | -0.036 |
| krt94 | 0.138 | si:ch211-51e12.7 | -0.036 |
| si:ch211-106h4.6 | 0.138 | srsf3b | -0.036 |
| col6a1 | 0.133 | cycsb | -0.035 |
| LO018422.1 | 0.131 | ilf3b | -0.035 |
| col11a2 | 0.129 | nono | -0.035 |
| nid1a | 0.128 | prmt1 | -0.035 |
| cnmd | 0.127 | tuba1a | -0.035 |
| LO018188.1 | 0.127 | hmgb3a | -0.034 |