| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lhx1a | 0.188 | sox3 | -0.185 |
| gata6 | 0.184 | id1 | -0.165 |
| cth1 | 0.181 | aldob | -0.158 |
| gata5 | 0.176 | si:ch1073-80i24.3 | -0.156 |
| FP102169.1 | 0.173 | marcksl1b | -0.153 |
| msgn1 | 0.172 | si:ch73-1a9.3 | -0.152 |
| dkk1b | 0.169 | asb11 | -0.149 |
| mespab | 0.169 | si:ch211-152c2.3 | -0.140 |
| efnb2b | 0.169 | hmgb2a | -0.138 |
| osr1 | 0.167 | si:ch211-222l21.1 | -0.138 |
| ism1 | 0.166 | hnrnpa0b | -0.135 |
| dusp4 | 0.165 | zic2b | -0.133 |
| flrt3 | 0.161 | si:dkey-56m19.5 | -0.131 |
| foxa | 0.159 | sox19a | -0.127 |
| pitx2 | 0.158 | stm | -0.125 |
| efna1a | 0.158 | polr3gla | -0.123 |
| frmd4ba | 0.157 | cxcr4b | -0.123 |
| kirrel3l | 0.157 | dynll1 | -0.112 |
| sp5a | 0.156 | hspb1 | -0.111 |
| trib3 | 0.150 | hmga1a | -0.107 |
| aplnrb | 0.147 | anp32a | -0.105 |
| ddit4 | 0.143 | foxd5 | -0.103 |
| plekhn1 | 0.142 | hmgn6 | -0.103 |
| snai1a | 0.142 | sb:cb81 | -0.099 |
| sox32 | 0.138 | atp1b1a | -0.099 |
| aldh1a2 | 0.135 | si:dkey-151g10.6 | -0.090 |
| ndr2 | 0.135 | ccnd1 | -0.089 |
| rbm38 | 0.135 | eef1a1l1 | -0.087 |
| zic2a | 0.135 | khdrbs1a | -0.086 |
| fgf3 | 0.133 | anp32e | -0.086 |
| cyp27c1 | 0.132 | sox2 | -0.083 |
| BX927327.1 | 0.129 | npm1a | -0.081 |
| ska2 | 0.128 | anp32b | -0.079 |
| btg4 | 0.127 | alcamb | -0.079 |
| mid1ip1l | 0.127 | srsf5a | -0.076 |