| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| zic2b | 0.341 | six1b | -0.081 |
| or120-1 | 0.307 | eya1 | -0.072 |
| BX469902.1 | 0.295 | si:ch211-152c2.3 | -0.066 |
| CU861459.1 | 0.294 | epcam | -0.066 |
| LOC795227 | 0.289 | cd9b | -0.066 |
| foxq2 | 0.278 | fthl27 | -0.065 |
| XLOC-040864 | 0.264 | si:dkey-222f2.1 | -0.064 |
| nox5 | 0.260 | f11r.1 | -0.058 |
| wnt1 | 0.259 | cldnb | -0.054 |
| CU929451.2 | 0.251 | ptbp1b | -0.053 |
| ddc | 0.247 | vamp8 | -0.051 |
| si:ch73-18b11.2 | 0.247 | spint1a | -0.051 |
| impg1b | 0.245 | dnase1l4.1 | -0.050 |
| zic1 | 0.244 | cavin2b | -0.049 |
| gng8 | 0.243 | COX7A2 (1 of many) | -0.049 |
| SH3RF3 | 0.232 | mcl1b | -0.048 |
| sinup | 0.232 | si:dkey-16l2.17 | -0.047 |
| sorcs3b | 0.231 | si:ch211-243g18.2 | -0.047 |
| XLOC-003678 | 0.216 | ppib | -0.046 |
| grm2b | 0.215 | hey1 | -0.046 |
| pth1ra | 0.213 | prr13 | -0.046 |
| otx2b | 0.213 | agr2 | -0.045 |
| zgc:153426 | 0.212 | CABZ01072614.1 | -0.044 |
| GJD4 | 0.207 | ap1s3b | -0.043 |
| th | 0.207 | chmp5b | -0.043 |
| zic5 | 0.207 | stm | -0.043 |
| rspo1 | 0.205 | glrx | -0.043 |
| si:dkey-279j5.1 | 0.204 | NC-002333.17 | -0.043 |
| CEP170B (1 of many) | 0.204 | calr3b | -0.043 |
| zic2a | 0.202 | higd1a | -0.042 |
| XLOC-035679 | 0.202 | six1a | -0.042 |
| six7 | 0.200 | igsf9a | -0.042 |
| synpr | 0.200 | cldn7b | -0.041 |
| zgc:162331 | 0.199 | cib1 | -0.041 |
| gria1a | 0.197 | pkp1b | -0.041 |