| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| zic2a | 0.375 | cadm3 | -0.102 |
| zic4 | 0.359 | h3f3a | -0.102 |
| zic5 | 0.290 | rpl37 | -0.100 |
| hspb1 | 0.240 | rps10 | -0.099 |
| apoeb | 0.225 | foxg1b | -0.086 |
| shisa2a | 0.219 | ppiab | -0.086 |
| zic3 | 0.213 | si:ch1073-429i10.3.1 | -0.085 |
| sox19a | 0.211 | zgc:114188 | -0.085 |
| cyp26a1 | 0.200 | rorb | -0.083 |
| si:ch211-152c2.3 | 0.199 | ckbb | -0.082 |
| stm | 0.198 | ptmaa | -0.081 |
| hesx1 | 0.193 | fabp7a | -0.078 |
| aldob | 0.192 | hnrnpa0l | -0.078 |
| nr6a1a | 0.191 | zgc:153409 | -0.074 |
| apoc1 | 0.184 | neurod4 | -0.069 |
| alcamb | 0.179 | btg1 | -0.069 |
| otx1 | 0.178 | gpm6aa | -0.068 |
| tdgf1 | 0.177 | rps17 | -0.068 |
| zic2b | 0.174 | COX3 | -0.067 |
| wls | 0.172 | pvalb2 | -0.067 |
| zmp:0000000624 | 0.171 | actc1b | -0.067 |
| COX7A2 | 0.170 | pvalb1 | -0.067 |
| LOC108190024 | 0.169 | CR383676.1 | -0.066 |
| NC-002333.4 | 0.169 | crx | -0.065 |
| pprc1 | 0.168 | atp5mc1 | -0.063 |
| gnl3 | 0.167 | gapdhs | -0.061 |
| si:ch211-69b22.5 | 0.164 | gpm6ab | -0.061 |
| plxdc2 | 0.163 | zgc:158463 | -0.061 |
| npm1a | 0.162 | atp5f1b | -0.061 |
| cxcr4a | 0.162 | otx5 | -0.061 |
| zic6 | 0.161 | mt-atp6 | -0.061 |
| bms1 | 0.161 | h3f3c | -0.060 |
| mybbp1a | 0.160 | mt-co2 | -0.059 |
| s100a1 | 0.159 | mpp6b | -0.059 |
| fbl | 0.159 | epb41a | -0.058 |