Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc32a1 | 0.153 | hmgb2a | -0.095 |
| gad2 | 0.120 | si:dkey-151g10.6 | -0.073 |
| slc6a1b | 0.120 | pcna | -0.070 |
| elavl4 | 0.117 | id1 | -0.068 |
| lhx1a | 0.117 | rplp1 | -0.068 |
| znf385c | 0.110 | stmn1a | -0.066 |
| gad1b | 0.108 | hmgb2b | -0.066 |
| nrxn3a | 0.107 | msna | -0.064 |
| slc6a5 | 0.105 | tuba8l4 | -0.063 |
| snap25a | 0.101 | hmga1a | -0.063 |
| gng3 | 0.100 | ranbp1 | -0.063 |
| sncb | 0.100 | rplp2l | -0.063 |
| LOC100330246 | 0.099 | mdka | -0.063 |
| stx1b | 0.098 | anp32b | -0.062 |
| atp6v1g1 | 0.096 | XLOC-003690 | -0.061 |
| atp6v0cb | 0.095 | rps12 | -0.061 |
| stxbp1a | 0.095 | snu13b | -0.060 |
| rtn1b | 0.094 | si:ch73-281n10.2 | -0.059 |
| ckbb | 0.094 | npm1a | -0.059 |
| pax2a | 0.093 | banf1 | -0.058 |
| vamp2 | 0.092 | chaf1a | -0.058 |
| sncgb | 0.092 | ccnd1 | -0.058 |
| ywhah | 0.091 | eef1a1l1 | -0.058 |
| id4 | 0.090 | selenoh | -0.057 |
| stmn1b | 0.090 | tuba8l | -0.057 |
| nova1 | 0.089 | nop58 | -0.057 |
| rnasekb | 0.089 | XLOC-003689 | -0.057 |
| atp6v1e1b | 0.089 | rrm1 | -0.057 |
| zgc:65894 | 0.088 | sox19a | -0.057 |
| cplx2l | 0.088 | dut | -0.056 |
| nsg2 | 0.088 | mki67 | -0.056 |
| syt2a | 0.088 | sox3 | -0.056 |
| tmem59l | 0.087 | nutf2l | -0.056 |
| tmsb2 | 0.087 | her15.1 | -0.055 |
| cacna2d3 | 0.087 | XLOC-003692 | -0.055 |