Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc6a5 | 0.208 | XLOC-003690 | -0.080 |
| slc32a1 | 0.188 | her15.1 | -0.076 |
| sncgb | 0.182 | id1 | -0.076 |
| pax2a | 0.181 | rplp1 | -0.075 |
| pax8 | 0.173 | hmgb2a | -0.075 |
| lhx1a | 0.165 | mdka | -0.070 |
| znf385c | 0.163 | cldn5a | -0.066 |
| slc30a2 | 0.161 | si:dkey-151g10.6 | -0.065 |
| cacna2d3 | 0.146 | XLOC-003689 | -0.064 |
| stx1b | 0.143 | notch3 | -0.063 |
| snap25a | 0.142 | sox3 | -0.063 |
| nrxn3a | 0.140 | msna | -0.062 |
| stxbp1a | 0.139 | rplp2l | -0.060 |
| mab21l2 | 0.137 | sdc4 | -0.059 |
| sncb | 0.134 | rpl23 | -0.057 |
| nrxn3b | 0.132 | btg2 | -0.057 |
| eno2 | 0.132 | tspan7 | -0.057 |
| atp6v0cb | 0.128 | rpl12 | -0.056 |
| cplx2 | 0.128 | sparc | -0.056 |
| sh3gl2a | 0.126 | vamp3 | -0.056 |
| rbfox1 | 0.125 | rpl11 | -0.056 |
| grin1a | 0.125 | rpl10a | -0.055 |
| syt2a | 0.124 | her4.2 | -0.055 |
| lhx5 | 0.124 | actb2 | -0.055 |
| gng3 | 0.124 | XLOC-003692 | -0.055 |
| vamp2 | 0.124 | msi1 | -0.055 |
| sypb | 0.124 | ran | -0.054 |
| klhl14 | 0.122 | her4.1 | -0.054 |
| cplx2l | 0.122 | rpl26 | -0.054 |
| slc35g2a | 0.121 | rps14 | -0.053 |
| elavl4 | 0.120 | COX7A2 (1 of many) | -0.053 |
| nkx1.2lb | 0.118 | tuba8l4 | -0.053 |
| cdk5r1b | 0.118 | rps7 | -0.052 |
| kcnc3a | 0.118 | rpl39 | -0.051 |
| ywhag2 | 0.118 | zgc:56493 | -0.051 |